Published April 24, 2019
| Version v0.7.0
Software
Open
ElucidataInc/ElMaven: v0.7.0
Authors/Creators
- Sahil1
- Shubhra Agrawal1
- Rishabh Gupta2
- GeorgeSabu
- Saiful B. Khan1
- kailash yadav
- Naman Gupta
- Raghav Sehgal
- kiranvarghese2
- Navdeep Singh
- rkdahmiwal
- Raghu Ram
- Giridhari Lal Gupta3
- Victor Chubukov4
- Mayank Mohindra
- Tanmay Goyal
- Omkar Pande
- tushar-chhabra
- sininagp
- Lance Parsons5
- Omkar Pande
- Abhishek Sharma
- 1. @ElucidataInc
- 2. KDE, @ElucidataInc
- 3. Elucidata
- 4. Agios
- 5. Princeton University
Description
Features
- MS/MS workflow with fragmentation matching (#974 )
- Save user settings in project format (.emDB) for a complete session restore experience (#969 )
- Peak classification (good/bad) on PollyPhi through Polly<sup>TM</sup> integration
- Metabolite quantification using QuantiFit in Polly<sup>TM</sup> integration for GUI and CLI (#984 )
- Project files from MAVEN (.mzrollDB) can be imported
Enhancements
- Read more fields from spectral library files (.msp) (#965 )
- Preserve multiple fragmentation records per compound from MSP files (#965 )
- Save 'peakSplineArea' and 'sample color' in project format (.emDB)
- Obi-warp alignment will work for MS/MS data where MS1 information is available
UI/UX
- Warning if sample polarity and spectral library (.msp) polarity do not match (#965 )
- Save last opened folder for database files (#965 )
- Add 'note' column in compound widget (#558 )
- Switch on isotope detection with C13 by default
- Deprecated tag for NA correction and mzroll format (#586 )
- Sample colors can only be changed manually once assigned during import (#634)
Bug Fixes
- Fixed missing sample intensities in CSV exported from emDB session (#976 )
- Manually integrated peaks had zero 'peakSplineArea' in Peak Detailed Format CSV
- Last compound was not read from spectral library files (.msp) (#965 )
- Low quality groups reported in automated detection (#970 )
- Values for 'abundance' and 'expected RtDiff' were switched in .emDB project (#962 )
- .emDB projects were not autosaved on Windows (#1007 )
- Fix crash on changing mass resolution with isotope widget open (#918 )
- Fix crash on deleting all samples
Others
- Project format (.emDB) versioning and backward-compatibility changes
- Updated build script for Mac OS (#1002)
- Added a code style guide for the project (#840)
- Improved crash-reports to ease the debugging process (#961 )
- Improve stability of crashreporter (#961 )
- Remove version from binary name
- Updated installation instructions in README for all platforms (#1002 )
- Refactor code for Polly-El-MAVEN integration
- Add triggers for Google Analytics
Files
ElucidataInc/ElMaven-v0.7.0.zip
Additional details
Related works
- Is supplement to
- https://github.com/ElucidataInc/ElMaven/tree/v0.7.0 (URL)