portugueslab/stytra: Documentation updates, enhancements and bug fixes

Published April 11, 2019 | Version v0.8.4

Software Open

New features

maximal stimulus display framerate can be set
added a new conditional stimulus that has a different conditions for the two possible switches (stim_on->stim_off) on condition_off and and (stim_on->stim_off) on condition_on This enables the TwoRadiusCenteringWrapper, a centering stimulus which appears when the fish disappears from the outer border and disappears when the fish is close to the center.
more improvements to conditional stimuli, please see API documentation for stimuli/conditional.
fish position estimator also allows querying velocity

Fixes

after long runs, Stytra does not hang on exit anymore (fix in ArrayQueues 1.2)
remaining protocol duration estimate is refreshed during execution, so protocols whose duration depends on the animal behavior (such as those with a CenteringWrapper) display more sensible numbers.
Stytra version, in addition to condition, is now saved
single source for log names, so that metadata corresponds to file names
the accumulators keep only a partial history if the protocol is not running, in order to prevent overflowing the memory.
fixed crash on capturing camera image if the experiment was not started yet

Changes in default behavior

CenteringWrapper has the radial centering stimulus by default, the non-centering stimulus is specified as the stimulus keyword argument

Documentation updates

Files

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portugueslab/stytra-v0.8.4.zip md5:ca6a024d71edebbcbafead9a6dfa06c5	23.0 MB	Preview Download