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Published January 25, 2017 | Version v1
Dataset Open

Processed read counts from macrophage RNA-seq and ATAC-seq experiments

  • 1. Wellcome Trust Sanger Institute

Description

RNA-seq files:

  1. RNA_count_matrix.txt.gz - raw read counts
  2. RNA_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package
  3. RNA_gene_metadata.txt.gz - information about the genes
  4. RNA_sample_metadata.txt.gz - information about the samples

ATAC-seq files:

  1. ATAC_count_matrix.txt.gz - raw read counts
  2. ATAC_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package
  3. ATAC_peak_metadata.txt.gz - peak coordinates and other metadata
  4. ATAC_sample_metadata.txt.gz - sample metadata

Files

Files (207.9 MB)

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