Published February 25, 2019
| Version v1
Dataset
Open
GTEx gene-level expression summary for Snaptron
Description
GTEx gene-level expression summary from the Snaptron collection. Format is a tab-separated text file compressed and indexed using BGZip, along with supplementary files containing a Tabix index for the data (ending in tbi) as well as two files describing the samples represented in the columns of the data file (ending in tsv). Uses GENCODE v25 annotation for quantification. Source data for the quantification are the bigWig files produced as part of recount2. More information at http://snaptron.cs.jhu.edu.
Notes
Supported by NIH grant R01GM118568 to BL and NIH Cloud Credits Pilot award CCREQ-2017-03-00086 to BL
Files
Files
(1.8 GB)
| Name | Size | Download all |
|---|---|---|
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md5:6809fa24d51a08113eba6e1dfef67638
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1.8 GB | Download |
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md5:00996997507eb0591f60ab603a786e37
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478.4 kB | Download |
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md5:d398df50ec6d5cb84c28d7d5fe814779
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6.5 kB | Download |
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md5:0b6eb6d14060f74073ebf19d932580fa
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23.7 MB | Download |
Additional details
Related works
- Is supplement to
- 10.1038/nbt.3838 (DOI)
- 10.1093/bioinformatics/btx547 (DOI)
- References
- 10.1038/ng.2653 (DOI)