Published February 14, 2019
| Version v3.0.4
Software
Open
milaboratory/mixcr: MiXCR v3.0.4
Authors/Creators
- 1. MiLaboratory
- 2. Institute for High Energy Physics
- 3. Mount Sinai School of Medicine
- 4. Ramaciotti Center for Human Systems Biology
Description
- Fixed problem with possibly incorrect clone-to-alignment mapping and clonotype sorting. The problem manifests itself in rare cercumstances, with
-OseparateByV/J/C=true(special thanks to Victor Greiff @GreiffLab for finding the bug and helping with testing) - Fixes exception while reading alignments from
clnafiles (thanks to Dr. Ma @JohnMCMa for finding the bug and providing the data to reproduce it) - Integration with new MiLib abstraction for CLI, to automatically infer when reanalysis is nedded and when not (this mechanism extracts paramteres from the target files, and checks if current command line sets the same options, if the options are the same, mixcr skips the step, otherwize restarts the analysis)
- Report for the
assemblecommand now contains chain distribution statistics analyzecommand now is case-insensitive for all options like--starting-material- Fixed exception arising in rare cases with sequence imputation on the export step
Files
milaboratory/mixcr-v3.0.4.zip
Files
(1.2 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/milaboratory/mixcr/tree/v3.0.4 (URL)