There is a newer version of the record available.

Published October 20, 2026 | Version v1

Biology - Barcoding

  • 1. Lord Byng Secondary School
  • 2. Independent Researcher

Description

We surveyed bacteria and fungi collected from a single household in Vancouver, Canada. Bacterial and fungal samples were obtained by culturing swabs from household surfaces and from tissue excised from mushroom fruiting bodies. The samples were amplified at the 16S rRNA gene (bacteria) or the ITS region (fungi), and sequenced by Sanger or Nanopore sequencing. Checking Basic Local Alignment Search Tool for Nucleotides (BLASTN; Altschul et al. 1990) against the nucleotide collection of National Center for Biotechnology Information (NCBI; Sayers et al. 2026) identified 27 of those 40 reads to genus or species level with reasonable confidence. All 27 sequences are now deposited in GenBank with confirmed accessions. The remaining 13 reads either returned no significant hit, matched only an uninformative "uncultured" clone, or fell below our confidence thresholds. The dataset is intended as a small, geographically precise addition to the growing record of household microbial and fungal diversity.

Files

article.pdf

Files (168.1 kB)

Name Size
md5:283d3d708210131f65647e46da3847c1
145.7 kB Preview Download
md5:bb3edba4fd938c33e0be436897e5dd8e
10.6 kB Preview Download
md5:ec78c9224f35e3cb4fabc0b48be9cec9
11.8 kB Preview Download