ASAP Data Repository
Published September 28, 2026 | Version v1
Computational notebook Open

DumasNJP2026_Lightsheet_alignment

Authors/Creators

  • 1. Oramacell
  • 2. Sorbonne Université, Institut du Cerveau–Paris Brain Institute- ICM, Inserm, CNRS, APHP, Hôpital de la Pitié Salpêtrière, 75013 Paris, France
  • 3. ROR icon Gubra (Denmark)
  • 4. ROR icon Lund University
  • 5. Gubra
  • 6. ROR icon Sorbonne Université

Description

Python code for the alignment of mouse brains from light-sheet microscopy for revised manuscript:
Para-subthalamic nucleus adjoins subthalamic nucleus and medial forebrain bundle, major DBS-targets in Parkinson’s disease, OCD, and depression | bioRxiv

Based on:
https://www.biorxiv.org/content/10.1101/2025.05.21.655268v2

Files

DumasNJP2026-main.zip

Files (15.7 kB)

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Additional details

Identifiers

URL
https://gitlab.com/asap_mackenzie/DumasNJP2026.git

Funding

Aligning Science Across Parkinson's
ASAP-020600
Aligning Science Across Parkinson's
ASAP-027214
Swedish Research Council
2021-04975
Hjärnfonden
FO2025-0272-HK-242
Swedish Parkinson Foundation
1632-25
Swedish Parkinson Foundation
1432-2022
Hållsten Research Foundation

Software

Repository URL
https://gitlab.com/asap_mackenzie/DumasNJP2026.git
Programming language
Python