Published September 24, 2026
| Version v0.1.1
Software
Open
peff_uniprot_fetcher: Fetch UniProt protein data and generate PEFF (PSI Extended FASTA Format) files
Description
peff_uniprot_fetcher generates PEFF (PSI Extended FASTA Format) files from the UniProt REST API. It fetches protein sequences and GFF annotations (natural variants, PTMs, processed forms) and writes them as annotated PEFF using pefftacular, with modification mapping backed by psimodpy, unimodpy, and uniprotptmpy. It requires Python 3.12 or later.
Files
tacular-omics/peff_uniprot_fetcher-v0.1.1.zip
Files
(66.6 kB)
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md5:f1cb1bd8e21760bf9ecb6d4fee422cc6
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Additional details
Identifiers
Related works
- Is supplement to
- https://github.com/tacular-omics/peff_uniprot_fetcher (URL)
Software
- Repository URL
- https://github.com/tacular-omics/peff_uniprot_fetcher