NLRP1 inflammasome axis in ulcerative colitis — analysis code, frozen six-gene coefficients and per-sample result tables
Authors/Creators
- 1. School of Pharmacy and Medical Laboratory Technology, Jiangsu Health Vocational College, Nanjing, China
Description
Code and key result tables accompanying the manuscript "Transcriptionalarchitecture of the human NLRP1 inflammasome axis in ulcerative colitis:a frozen six-gene program that tracks inflammatory state but is notgermline-driven — multi-cohort, cross-platform and single-cellevaluation". Contents: data download and preprocessing scripts (GEO seriesGSE59071/GSE48958/GSE73661/GSE87466/GSE94648/GSE107499; CELLxGENE IBDatlas), NLRP1-axis gene-set assembly, nested cross-validation withfrozen six-gene coefficients (ERBIN, CARD6, CASP4, MAP3K20, CASP6,IFI16), external and cross-platform validation, single-cell donor-levelpseudobulk, two-sample cis-MR and colocalization; per-sample scoretables, DE/AUC/immune-enrichment result tables, figure source files. All input data are public (GEO / CELLxGENE); no new data were generated.Archive and data/code queries: zhongy5008@163.com.