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Published September 20, 2026 | Version v1.0.0

Reproducibility package for controlled multi-regime evaluation of drug-target affinity models

Authors/Creators

Description

Reproducibility release accompanying the manuscript:

"Model Rankings in Drug–Target Affinity Prediction Vary Across Evaluation Regimes: A Controlled Multi-Seed Study of Model-Comparison Reliability"

This release contains:

  • frozen split indices and cryptographic hashes;
  • source code for the three primary fusion models;
  • controlled DeepDTA-style and GraphDTA-GCN-style baselines;
  • formal experimental configurations;
  • final run-level and aggregated results for all 126 prespecified evaluations;
  • integrity-audit and held-out-test provenance materials;
  • the exploratory VEGFR2 case-study analysis;
  • the formal software-environment specification.

The original KIBA and Davis datasets are not redistributed in this repository.

Notes

If you use this software or its accompanying reproducibility materials, please cite the associated manuscript.

Files

qingqingyuanyuan/dta-model-comparison-reliability-v1.0.0.zip

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