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Published September 17, 2026 | Version 1.5.25
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Reproducibility package: Target–Reliability–Comparison audit for genomic surveillance count forecasts

Description

Executable Target–Reliability–Comparison (TRC) audit CLI and pinned results for genomic surveillance count-PMF forecasts (H3N2 / SARS-CoV-2), companion to a Briefings in Bioinformatics Problem Solving Protocol manuscript.

Version 1.5.25 adds verified --final-pmf-mean-tol toy paths (examples/toy_final_pmf_match.tsv / toy_final_pmf_mismatch.tsv), updates reproduce_toy.sh, and records comparison_gate_scope in CLI JSON.

Includes scripts_audit/audit_count_forecasts.py, schemas, tests, panel locks, and pinned primary JSON ledgers.

Concept DOI: 10.5281/zenodo.22702658

Files

genomic-surveillance-count-forecast-audit_v1.5.25.zip

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