Published December 13, 2018
| Version 1.1.1
Software
Open
Convenient interface to inverse Ising (ConIII): A Python 3 package for solving Ising-type maximum entropy models
Authors/Creators
- 1. Cornell University, Santa Fe Institute, Arizona State University
- 2. Santa Fe Institute, Arizona State University
Description
ConIII (pronounced CON-ee) is an open-source Python project providing a simple interface to solving the pairwise and higher order Ising model and a base for extension to other maximum entropy models. We describe the maximum entropy problem and give an overview of the algorithms that are implemented as part of ConIII (\url{https://github.com/eltrompetero/coniii}) including Monte Carlo histogram, pseudolikelihood, minimum probability flow, a regularized mean field method, and a cluster expansion method. Our goal is to make a variety of maximum entropy techniques accessible to those unfamiliar with the techniques and accelerate workflow for users.
Files
Files
(4.9 MB)
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md5:b90ad64cfb902e74b733deac6a650b89
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