UExP-FNN-U full surface ocean carbonate system
Authors/Creators
Description
Product Information
| Product name | UExP-FNN-U | |
| SOCOM-style name | UExP-FNN-U | |
| Product version | v2026-1 | Changelog at end of repository |
| Coverage |
January 1980 – December 2025 |
Global ocean (including under ice regions) at ~0.2 m depth |
| Resolution | Monthly 1° x 1° | |
| Contact | Daniel J. Ford d.ford@exeter.ac.uk |
Jamie D. Shutler j.d.shutler@exeter.ac.uk |
| Traceable code and inputs | Information on the input datasets and code can be found after the changelog |
Product Description
The UExP-FNN-U approach is described in detail within Ford et al. (2024a) and therefore we provide a summary of the algorithm for interpolating the fugacity of CO2 in seawater (fCO2 (sw)). The UExP-FNN-U is a two step neural network interpolation technique, the self-organising map feed forward neural network (SOM-FNN) (Landschützer et al., 2014, 2016). The first step is a self-organising map (SOM) which was used to divide the global oceans into regions, or provinces, of similar oceanic conditions. The inputs to this step were monthly climatology of sea surface temperature (SST) from the European Space Agency Climate Change Initiative (ESA-CCI) SST, merged sea surface salinity (SSS) from the CCI and the CMEMS reanalysis (GLORYS12V1; merged using a hierarchy approach described in Gregor et al., 2024), CMEMS GLORYS12V1 mixed layer dapth (MLD), and spatailly and temporally complete OC-CCI chlorophyll-a (chl-a) (Ford et al. 2026a; Sathyendranath et al. 2019) and the Takahashi et al. (2009) fCO2 (sw) climatology updated in Fay et al. (2024). The SOM produces 16 provinces, and two manual provinces are implemented to cover the Arctic Ocean and Mediterranean + Red Sea using Longhurst biogeochemical provinces (Longhurst, 1998). The second step uses a feed forward neural network (FNN) ensemble (10 members) for each province to estimate the relationships between the target variable (i.e in situ fCO2 (sw) from the recalculated SOCAT dataset; Bakker et al., 2016; Ford et al., 2025; Ford et al. 2026c) and oceanic properties that likely control their variability. For the UExP-FNN-U v2026-pre1 these were SST, SSS, MLD, chl-a and xCO2 (atm) and anomalies of each.
In v2026-pre1, we implemented a probability based SOM approach, which provides a probability that each monthly 1 degree pixel is assigned to each of the 18 provinces. To achieve the probabilities, the SOM training occurs as in Ford et al. (2024a) and then the inputs are perturbed within the limits of their uncertainties and the resulting SOM provinces retrieved for 400 ensembles. The probability that each monhtly 1 degree regions fall within a province are calculated. If a province probability is found to be less than 5%, this is set to 0 % to reduce computation. Locations where the sum of the probability is greater than 1 or less than 1 are scaled linearly to equal 1. In the FNN training stage the provinces are defined for the initial SOM (i.e the hard provinces that the SOM predicts with the data unperturbed). In the mapping stage the fCO2 (sw) and the uncertainties are predicted for each location and province, and a weighted sum of the resulting fCO2 (sw) and uncertainties is taken. This approach was shown to reduce large biases at the edge of provinces and reduced the appearance of provinces in the geographical outputs within a model testbed approach within the Surface Ocean CO2 mapping intercomparison (SOCOMv2 Experiment 2; Roobaret et al. 2026). Additionally, the global ocean CO2 sink for v2026-pre1 using the standard SOM approach as in Ford et al. (2024a) compared to this updated probability approach showed only minor differences (~2%). We have used this same probability based apporach in v2026-1.
Expansion to Total Alkalinity using a consistent SOM-FNN
The UExP-FNN-U approach was expanded to estimate Total Alkalinity (TA) on the same monthly 1 degree grid. The first step, the SOM, was trained on a monthly climatology of CCI-SST, CCI+CMEMS SSS and an annual TA climatology (DIVA interpolated in situ TA). Gregor and Gruber (2021) use the gridded GLODAPv2.2016 surface TA field for this step, but these have not been updated in recent years. Therefore, we use a merged in situ TA dataset produced from observations in GLODAPv3 (Lange et al. submitted) , SNAP-O-CO2v2 and Sharkweb datasets to produce a surface TA annual climatology using DIVA interpolation (Schlitzer and Reiner 2025). Data are currently too sparse to produce a monthly climatology of TA (highlighted in Gregor and Gruber; 2021). The SOM produces 16 provinces for the second FNN step, and there were no manual province modifications for TA.
For the FNN step, as described in Gregor and Gruber (2021) the available TA observations are much lower than that for fCO2 (sw). Gridding the TA observations onto a monthly 1 degree grid before input into the UExP-FNN-U would greatly reduce the available constraints. Consistent to Gregor and Gruber (2021), the individual bottle observations were provided to the neural network (as the target), and the coincident temperature, salinity, and the WOA phosphate and silicate (WOA nutrients extracted from the monthly 1 degree climatology and linear interpolated to the spatial location). This parameter combination was consistent to Gregor and Gruber (2021), and testing indicated from the quality assessment this was the optimal parameter choice.
For the mapping to a monthly 1 degree global grid, the CCI-SST, CCI+CMEMS SSS and WOA phosphate and silicate (for the WOA nutrients monthly climatologies) were used. The selection of CCI-SST and CMEMS SSS ensures that the TA fields are produced to the same SST and SSS as the fCO2 (sw), and therefore consistency in the carbonate system. In 2026-1 we also use the probability based SOM approach for the TA mapping as descirbed in the fCO2 (sw) section.
Calculation of full surface ocean carbonate system
The remaining components of the carbonate system (i.e DIC, pH etc) were calculated from fCO2 (sw) and TA using pyCO2SYS (v1.8.3.3) (Humphreys et al., 2022, 2024). The calculation also requires SST, SSS, phosphate and silicate, where the same temperature, salinity and nutrient datasets were used (as used in the neural network stages) to consistently calculate the carbonate system. pH was calculated on the total scale. The dissociation constants of Lueker et al. (2000), bisulfate dissociation constants of Dickson (1990) and total boron-salinity relationship of Uppström (1974) were used as recommended in Orr et al. (2015) and Raimondi et al. (2019) (and are the default sets used in pyCO2sys). The surface ocean carbonate system was therefore considered representative of ~0.2 m water depth.
Uncertainties due to the fCO2 (sw), TA, SST, SSS, phosphate and silicate were propaged through the caluclations providing a uncertainty due to each component and a total uncertainity. In v2026-1, we also add an uncertainty component due to the dissociation constants as provided in Orr et al. (2018).
Calculation of air-sea CO2 fluxes
The air-sea CO2 fluxes (F) were calculated, such that vertical temperature gradients can be accounted for (Dong et al., 2022, 2024; Ford, Shutler, et al., 2024; Shutler et al., 2020; Watson et al., 2020; Woolf et al., 2016, 2019) as described in detail by Woolf et al. (2016), using FluxEngine v4.2.0 (Holding et al., 2019; Shutler et al., 2016). The CO2 flux takes the form:
F = K600 (Sc / 600)-0.5 (αsubskin fCO2(sw, subskin) – αskin fCO2(atm)) (1-ice)
where K600 is the gas transfer coefficient estimated using the Nightingale et al. (2000) parameterisation and wind speeds from the CCMP (v3.1) (Mears et al., 2022; Remote Sensing Systems et al., 2022). Sc is the Schmidt number estimated using the calculation in Wanninkhof et al. (2014) and the ocean’s skin temperature. α is the solubility of CO2 at the respective subskin or skin temperature and salinities which was estimated as in Weiss (1974). fCO2 (atm) and fCO2 (sw,subskin) are the fugacity of CO2 in the atmosphere and the seawater subskin layer respectively. The CCI-SST and CCI+CMEMS SSS are considered representative of the subskin temperature and salinities and used in the calculation of αsubskin. For the atmospheric side, the ocean’s skin temperature was estimated from the CCI-SST with a cool skin deviation calculated with NOAA-COARE3.6 (Edson et al., 2013; Fairall et al., 1996) using CCMP wind speed, CCI-SST and ERA5 fields as inputs. Skin salinity was calculated assuming a +0.1 psu change from the CCI+CMEMS SSS (i.e a salty skin) as in Watson et al. (2020) and Woolf et al. (2019). fCO2 (atm) was calculated using NOAA-GML atmospheric dry mixing ratio of CO2 (xCO2 (atm); Lan et al., 2023), the skin temperature and ERA5 atmospheric pressure following Dickson et al. (2009). Sea ice concentrations from the OSISAF dataset (OSI SAF, 2022) were used for the ice component.
Variables
All variables are provided in a single netCDF file, that has been zipped to reduce file sizes with a filename: Fordetal_UExP-FNN-U_surface-carbonate-system_vXXXX-X.nc. XXXX-X refers to the version number.
|
Variable |
Units |
Description |
|
alpha |
mol m-3 uatm-1 |
Solubility of CO2 in seawater |
|
alpha_skin |
mol m-3 uatm-1 |
Skin solubilty of CO2 in seawater |
|
area |
m2 |
Total surface area of each 1 degree region |
|
dic |
μmol kg-1 |
Dissolved Inorganic Carbon |
|
fco2 |
μatm |
Fugacity of CO2 in seawater |
|
flux |
g C m-2 d-1 |
Air-sea CO2 flux (+ve indicates outgassing) |
|
ice |
unitless |
Sea ice concentration |
|
kw |
cm hr-1 |
Gas transfer velocity |
|
mask_sfc |
unitless |
Proportion of ocean in each 1 degree region |
|
pH |
unitless |
pH on the total scale (i.e [H+] + [HSO4-]) |
|
pH_free |
unitless |
pH on the free scale (i.e [H+]) |
|
saturation_aragonite |
unitless |
Aragonite Saturation State |
|
skin_salinity |
psu |
Skin Salinity |
|
skin_temperature |
ºC |
Skin Temperature |
|
subskin_salinity |
psu |
Subskin Salinity |
|
subskin_temperature |
ºC |
Subskin Temperature |
|
ta |
μmol kg-1 |
Total Alkalinity |
|
wind_speed |
m s-1 |
Wind speed |
|
wind_speed_second_moment |
m2 s-2 |
Second moment of wind speed |
Each variable contains an uncertainty estimate that follows the BIPM (2008) principles, comprising of multiple components and then a total uncertainty. We refer the user to the netCDF file for available uncertainties, but in most cases the total uncertainty is the required component.
Acknowledgements and Funding
This dataset has been funded by funding from the European Space Agency under the projects ‘Satellite-based observations of Carbon in the Ocean: Pools, Fluxes and Exchanges’ (SCOPE; 4000142532/23/I-DT) and ‘Ocean Carbon for Climate’ (OC4C; 3-18399/24/I-NB). This dataset was also funded by OceanICU which was funded by the European Union under grant agreement no. 101083922 and UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee [grant number 10054454, 1006367, 10064020, 10059241, 10079684, 10059012, 10048179]. Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or European Research Executive Agency. Neither the European Union nor the granting authority can be held responsible for them. This dataset also acknowledges the Convex Seascape Survey.
The Surface Ocean CO₂ Atlas (SOCAT) is an international effort, endorsed by the International Ocean Carbon Coordination Project (IOCCP), the Surface Ocean Lower Atmosphere Study (SOLAS) and the Integrated Marine Biosphere Research (IMBeR) program, to deliver a uniformly quality-controlled surface ocean CO₂ database. The many researchers and funding agencies responsible for the collection of data and quality control are thanked for their contributions to SOCAT. We acknowledge The Swedish Agency for Marine and Water Management (HaV) and the Swedish Meteorological and Hydrological Institute (SMHI) for providing access to hydrographic data through the Shark Archive (https://shark.smhi.se/en).
Changelog
|
Version |
Changes since previous version |
|
v2026-1 |
|
|
v2026-pre1 |
|
|
v2025-1 |
|
|
v2025-0 |
|
|
v2024-5 |
|
|
Prior versions |
|
Traceable input datasets
| Variable | Dataset | Version | Reference |
| Wind speed | Cross-Calibrated Multi-Platform | v3.1 | Dataset: Remote Sensing Systems (2022; https://doi.org/10.56236/rss-uv6h30) Reference: Mears et al. (2022) |
| Sea surface temperature | ESA CCI-SST | v3.0 | Dataset: Good and Embury (2024; https://dx.doi.org/10.5285/4a9654136a7148e39b7feb56f8bb02d2) References: Embury et al. (2024) |
| Sea Surface Salinity | ESA CCI-SSS | v5.5 | Dataset: Boutin et al. (2025; https://catalogue.ceda.ac.uk/uuid/3339dec1fbd94599802aba7f1c665679) References: Boutin et al. (2021) |
| Sea Surface Salinity | CMEMS GLORYS12V1 | v202311 | Dataset: https://doi.org/10.48670/moi-00021 Reference: Jean-Michel et al. (2021) |
| Mixed Layer Depth | CMEMS GLORYS12V1 | v202311 | Dataset: https://doi.org/10.48670/moi-00021 Reference: Jean-Michel et al. (2021) |
| Chlorophyll-a | Monthly gap filled Ocean Colour Climate Change Initiative (OC-CCI) chlorophyll-a using BGC-Argo as an observational constraint | v1-0 |
Dataset: Ford et al. (2026b; https://zenodo.org/records/19555449) |
| Atmospheric dry mixing ratio of CO2 | NOAA-GML Marine Boundary Layer |
No version provided |
Dataset: Lan et al. (2023; https://doi.org/10.15138/DVNP-F961) |
|
fCO2 (sw) climatology |
fCO2 (sw) climatology |
v2.2 |
Dataset: Fay et al. (2023; https://doi.org/10.25921/295g-sn13) Reference: Fay et al. (2024) |
| Land cover | ESA CCI-Land Water bodies mask |
v4.0 |
Dataset: Avaiable via FTP - https://maps.elie.ucl.ac.be/CCI/viewer/download.php Reference: Lamarche et al. (2017) |
| Recalculated SOCATv2026 fCO2 (sw) observations | Recalculated SOCATv2026 |
v0-1 |
Dataset: Ford et al. (2026e; https://doi.org/10.5281/ZENODO.15656802) |
| Total Alkalinity, pH, Dissolved Inorganic Carbon | GLODAP |
v3 |
Dataset: Lange et al. (2026; https://doi.org/10.25921/m6tp-mj50) |
| Total Alkalinity, pH, Dissolved Inorganic Carbon | SNAP-O-CO2 | v2 |
Dataset: Metlz et al. (2024; https://doi.org/10.17882/102337) |
| Total Alkalinity | Shark | No version provided (ingested 23rd July 2026) |
Dataset: Data subset from: https://shark.smhi.se |
| Nitrate, Phosphate, Silicate | World Ocean Atlas | v2023 |
Dataset: Reagan et al. (2023; https://doi.org/10.25921/VA26-HV25) |
| Wind speed | ERA5 |
Dataset: Hersbach et al. (2023; https://doi.org/10.24381/cds.adbb2d47) |
|
| Air pressure, boundary layer height, longwave downward radiation, shortwave downward radiation | ERA5 |
Dataset: Hersbach et al. (2019; https://doi.org/10.24381/cds.f17050d7) |
|
| Sea ice concentration | OSISAF | v3.0 |
Dataset: OSISAF (2022; https://doi.org/10.15770/EUM_SAF_OSI_0013) |
| Bathymetry | GEBCO | v2023 |
Dataset: GEBCO Compilation Group (2023) |
Traceable software
| Software | Version | Reference | Github/Location |
| UExP-FNN-U base code (including Python environment install) | v2026-1 |
Ford et al. (2024) |
https://github.com/JamieLab/OceanICU |
| FluxEngine | v4.2.0 | Shutler et al. (2016) Holding et al. (2019) |
https://github.com/oceanflux-ghg/FluxEngine https://pypi.org/project/fluxengine/4.2.0/ |
| PyCO2SYS | v1.8.3.3 | Humphreys et al. (2022) Humphreys et al. (2024) |
https://github.com/mvdh7/PyCO2SYS |
| NOAA-COARE | v3.6 | https://github.com/NOAA-PSL/COARE-algorithm/tree/master | |
| Ocean Data Viewer | v5.7.0 | Schlitzer and Reiner (2025) | https://odv.awi.de/ |
References
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Ford, D. J., Kulk, G., Sathyendranath, S., & Shutler, J. D. (2026b). Monthly gap filled Ocean Colour Climate Change Initiative (OC-CCI) chlorophyll-a using BGC-Argo as an observational constraint (v1-0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.19555449
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