Published August 19, 2026
| Version 2026.8.0
Software
Open
HADDOCK3 - modular integrative modelling software
Authors/Creators
- 1. Zymvol
- 2. @UtrechtUniversity
- 3. Utrecht University
- 4. Netherlands eScience center
- 5. @haddocking
- 6. @zymvol
- 7. Netherlands eScience Center
Description
HADDOCK3 2026.8.0
Changes since 2026.7.0.
:jigsaw: New Modules
- Added the
deeprankscoring module - this module scores complexes using deeprank-gnn-esm, a graph neural network that predicts the fraction of native contacts (fnat) between two chains of an interface (#1480) - Added the
rnascananalysis module - this module performs a mutagenesis scan of each RNA base in the interface, following short energy minimisation, and outputs the difference in HADDOCK score between wild-type and mutated models (#1632)
:books: New notebooks
- HADDOCK3 basic protein-DNA notebook (#1629)
- HADDOCK3 basic protein-glycan notebook (#1630)
:beetle: Bug Fixes
- Corrected ranking in caprieval for reverse sorting - now
seletopis adapted todeeprankoutput (#1622, #1623) - Fixed
gen_archivecrash on non-local filesystems (#1627) - Added missing improper for HYP (#1663)
- Fixed chirality detection by adding (if needed) and keeping HA for all residues (#1637)
:broom: Maintenance
- Added
ctrl-cctrl-vguidelines (#1635) - Added workflow module ordering validation (#1651)
Full Changelog: https://github.com/haddocking/haddock3/compare/2026.7.0...2026.8.0
Notes
If you use this software, please cite it using these metadata.
Files
haddocking/haddock3-2026.8.0.zip
Files
(23.5 MB)
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md5:a366266065cb60fecc1545daf4c978c0
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Additional details
Related works
- Is supplement to
- Software: https://github.com/haddocking/haddock3/tree/2026.8.0 (URL)
Software
- Repository URL
- https://github.com/haddocking/haddock3