In-house Whole Plasmid Sequencing

Published August 14, 2026 | Version v1.0.0

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An in-house workflow for multiplexed whole-plasmid sequencing and per-barcode de novo assembly.

Notes

If you use this workflow, please cite the repository and the Flye and SeqKit publications listed in the documentation.

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Is supplement to: Software: https://github.com/takeisue1270/In-house-whole-plasmid-sequencing/tree/v1.0.0 (URL)

Repository URL: https://github.com/takeisue1270/In-house-whole-plasmid-sequencing

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Zenodo

License: MIT License

A short and simple permissive license with conditions only requiring preservation of copyright and license notices. Licensed works, modifications, and larger works may be distributed under different terms and without source code. Read more