Published August 11, 2026
| Version v1.0.0
Software
Open
MetaBarFlow: a generalised, marker-agnostic metabarcoding pipeline
Authors/Creators
Description
MetaBarFlow is a reproducible Illumina paired-end amplicon metabarcoding pipeline (merge, quality check, primer trimming, DADA2 ASV inference, and taxonomy assignment) that is configurable for any marker, with ready-to-use configurations for 18S (protists), ITS (fungi), and 16S (bacteria/archaea). It also includes a downstream statistics stage (filtering, rarefaction, and dataset-quality diagnostics).
Notes
If you use MetaBarFlow, please cite it using the metadata below.
Files
DavidSinger85/MetaBarFlow-v1.0.0.zip
Additional details
Related works
- Is supplement to
- Software: https://github.com/DavidSinger85/MetaBarFlow/tree/v1.0.0 (URL)
Software
- Repository URL
- https://github.com/DavidSinger85/MetaBarFlow