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Published July 21, 2026 | Version 1.1.0
Software Open

akikuno/TSUMUGI-dev: 1.1.0

Authors/Creators

  • 1. University of Tsukuba

Description

v1.1.0 (2026-07-22)

🖼️ User Interface

  • Add a toggle to show or hide module borders in visualizations
    Issue: #168

  • Optimize large Gene page network rendering without reducing graph data
    Issue: #172

  • Add soft/fuzzy phenotype modules to the Gene page Issue: #173

  • Fix layout selection and prevent excessive node spacing
    Issue: #174

  • Add module display switching to Phenotype and Gene List pages
    Issue: #175

  • Filter Phenotype page edges by exact target phenotype annotation
    Issue: #176

  • Reduce raster export scale and guard large module frame exports
    Issue: #179

🚀 Performance

  • Speed up pairwise phenotype ancestor pruning
    Issue: #171

🐛 Bug Fixes

  • Align Phenodigm calculation with the original paper
    Issue: #170

  • Make MICA tie-breaking deterministic using ontology descendant counts
    Issue: #180

🔧 Maintenance

  • Handle missing IMPC effect_size values as NaN instead of 0 in TSUMUGI records Issue: #165

📝 Documentation

  • Standardize "Severity" terminology to "Effect size" in TSUMUGI
    Issue: #177

Files

akikuno/TSUMUGI-dev-1.1.0.zip

Files (2.3 MB)

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md5:25c4692e4669c433dc950d3cd9764b44
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Additional details

Related works

Is supplement to
Software: https://github.com/akikuno/TSUMUGI-dev/tree/1.1.0 (URL)

Software

Repository URL
https://github.com/akikuno/TSUMUGI-dev