cfoldseeker_databases
Published July 9, 2026 | Version v1
Dataset Open

Streptomyces_expanded

Authors/Creators

  • 1. ROR icon VIB-KU Leuven Center for Microbiology

Description

Streptomyces (txid1883), Nocardia (txid1817), Kribbella (txid182639), Burkholderia (txid32008), Actinoalloteichus (txid65496)

Genomic data was sourced from NCBI, excluding unannotated assemblies and atypical genomes. A complete list of downloaded accessions is included in all_ncbi_accession_codes.txt

FoldSeek database created using FoldSeek 10.941cd33

MMseqs sequence preclustering table created with MMseqs 18.8cc5c using a sequence identity threshold of 90% and a coverage threshold of 90%

CDS context database created using cfoldseeker 0.2.0

Files

all_ncbi_accession_codes.txt

Files (12.5 GB)

Name Size
md5:69649f72edc159cda2bfd112775c1cf0
345.0 kB Preview Download
md5:33247e014cc7c86f3e3680b5ce4a2e01
3.2 GB Download
md5:de9cea08a875d8f6e7476dfdc7941aeb
472.6 MB Download
md5:3cde966e1d4d4a86e26d1ccee51c36da
8.8 GB Download