Published July 6, 2026 | Version v1

Curated gene annotation of Phytophthora plurivora (GFF3)

  • 1. ROR icon Universidad de Valladolid

Description

Curated, high-confidence structural gene annotation of Phytophthora plurivora (strain TJ71), provided in GFF3 format (15,415 gene models; gene, mRNA, exon, and CDS features).

The annotation was generated with a BRAKER3-based structural prediction pipeline, followed by a custom curation workflow combining transcript deduplication, repeat- and expression-aware filtering, a heuristic homology-and-topology scoring scheme, and directed manual curation. This dataset was produced as part of the associated manuscript describing the genome annotation and two-speed genome architecture of P. plurivora.

This annotation is built on the previously published genome assembly available at NCBI GenBank under accession ASM3002794v1. The genome FASTA itself is not included in this deposit.

See the accompanying README.txt for full file description, methods summary, and locus tag conventions.

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README.txt

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