Published July 1, 2026
| Version v2
Dataset
Open
The Human Gut Mycobiome Atlas
Description
- Fungi remain understudied in the human gut owing to marker-specific analytical challenges and fragmented datasets.
- Here, we developed MycoGAP, a gut-focused, ITS-aware workflow for standardized reanalysis of heterogeneous datasets.
- Using MycoGAP, we constructed the Human Gut Mycobiome Atlas from 46,400 samples spanning diverse populations and linked to harmonized metadata, yielding 3.1 billion microfungal sequences.
- Together, MycoGAP and the Atlas provide a standardized framework and global resource for understanding gut fungal ecology and its relevance to human health.
Files
README.md
Files
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Additional details
References
- MycoGAP (tool for the Atlas data processing): https://github.com/WeStrainGroup/MycoGAP
- Code for the Atlas: https://github.com/WeStrainGroup/Fungi_Atlas
- HuGMycoA (R package of the Atlas): https://github.com/WeStrainGroup/HuGMycoA
- WebSite for the Atlas: https://zheng.lab.westlake.edu.cn/Resource/Resource_GlobalFungi.htm