Scripts: BAR 1.1.4

Published July 18, 2015 | Version 1.4.4

Software Open

Segmentation improvements:
- Thresholding macros work better with 16 and 32-bit
- Wipe Background provides better feedback on the number of filtered particles. Prompt now features built-in help with description of filtering ranges
Strahler Analysis improvements:
- Strategy has been re-written to address issues #11 and #12, using a consistent definition of branch across the pruning iteration
- Counts are no longer inferred from N. of end-points and branch counts are directly verifiable from Strahler mask
- Important change for 3D skeletons: Final segmentation is performed on a 2D projection (Strahler mask) and not on the 3D structure. However, elimination of closed loops is still performed in 3D
- Lengths are now retrieved (in calibrated units)
- Detailed parameters are now displayed in a dedicated table
- Calibration bar is resized proportionally to canvas of analyzed image
Toolsets improvements:
- Added an option to ROI Manager Tools to select multiple ROIs by pattern
- Added an option to Menu Tools generated by Toolset Creator to reveal listed directory
- Toolset Creator no longer ignores non-JavaScript files (bsh, clj, py, groovy, etc)
Bug fixes:
- Plotting routines no longer trigger spurious Console messages (#10)
- HTML of built-in help dialogs of older macros is rendered properly in IJ 1.49o and later
- Improved javadocs (download)

Files

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Scripts-1.4.4.zip md5:b4a96df84e74bddc00b8613d0138e461	147.8 kB	Preview Download