Published March 30, 2017 | Version v1
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Ontogenetic changes in mouth morphology triggers conflicting hypotheses of relationships in characid fishes (Ostariophysi: Characiformes)

  • 1. Programa de Pós-Graduação em Biologia Animal, Universidade Federal do Rio Grande do Sul, 91501-970 Porto Alegre, RS, Brazil.
  • 2. Departamento de Genética, Universidade Federal do Rio Grande do Sul, 91501-970 PortoAlegre, RS, Brazil
  • 3. Departamento de Zoologia, Universidade Federal do Rio Grande do Sul, 91501-970 Porto Alegre, RS, Brazil

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Hirschmann, Alice, Fagundes, Nelson J. R., Malabarba, Luiz R. (2017): Ontogenetic changes in mouth morphology triggers conflicting hypotheses of relationships in characid fishes (Ostariophysi: Characiformes). Neotropical Ichthyology 15 (1), No. e160073: 1-16, DOI: 10.1590/1982-0224-20160073, URL: http://dx.doi.org/10.1590/1982-0224-20160073

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  • Abell R, Thieme ML, Revenga C, Bryer M, Kottelat M, Bogutskaya N, Coad B, Mandrak N, Balderas SC, Bussing W, Stiassny MLJ, Skelton P, Allen GR, Unmack P, Naseka A, Ng R, Sindorf N, Robertson J, Armijo E, Higgins JV, Heibel TJ, Wikramanayake E, Olson D, Lopez HL, Reis RE, Lundberg JG, Perez MHS, Petry P. Freshwater ecoregions of the world: a new map of biogeographic units for freshwater biodiversity conservation. BioScience. 2008; 58(5):403-14. Available from: http://dx.doi.org/10.1641/b580507
  • Baicere-Silva CM, Ferreira KM, Malabarba LR, Benine RC, Quagio-Grassiotto I. Spermatic characteristics and sperm evolution on the subfamily Stevardiinae (Ostariophysi: Characiformes: Characidae). Neotrop Ichthyol. 2011; 9(2):377-92. Available from: http://dx.doi.org/10.1590/S1679- 62252011005000014
  • Bandelt HJ, Forster P, Rohl A. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol. 1999, Jan; 16(2):37-48.
  • Bertaco VA, Ferrer J, Carvalho FR, Malabarba LR. Inventory of the freshwater fishes from a densely collected area in South America - a case study of the current knowledge of Neotropical fish diversity. Zootaxa. 2016; 4138(3):401-40. Available from: http://dx.doi.org/10.11646/zootaxa.4138.3.1
  • Bermingham E, McCafferty SS, Martin AP. Fish biogeography and molecular clocks: perspectives from the Panamanian Isthmus. In: Kocher TD, Stepien CA, editors. Molecular systematics of fishes. San Diego: Academic Press; 1997. p.113-28.
  • Bohlke JE. Studies on fishes of the fish family Characidae, No. 7: a new genus and species of glandulocaudinae characids from central Brazil. Stanford Ichthyological Bulletin. 1954; 4(4):265-74.
  • Charcansky A. Estudo comparado da denticao em representantes da ordem Characiformes (Teleostei, Ostariophysi, Othophysi). [MSc Dissertation on the Internet]. Porto Alegre: Pontificia Universidade Catolica do Rio Grande do Sul; 2006. Available from:RepositorioInstitucionalPontificiaUniversidadeCatolica do Rio Grande do Sul. http://hdl.handle.net/10923/5383
  • Conselho Estadual do Meio Ambiente (CONSEMA). Resolucao Consema Nº 002. Florianopolis, Santa Catarina: Secretaria de Estado do Desenvolvimento Economico Sustentavel, Conselho Estadual do Meio Ambiente (CONSEMA); 2011 [2011 Dec 06].
  • Cooke GM, Beheregaray LB. Extremely high variability in the S72 intron of theAmazonian cardinal tetra(Paracheirodon axelrodi). J Fish Biol. 2007, Aug; 71(Suppl.A):132-140. Available from: http://dx.doi.org/10.1111/j.1095-8649.2007.01478.x
  • Drummond AJ, Ashton B, Buxton S, Cheung M, Cooper A, Duran C, Heled J, Kearse M, Markowitz S, Moir R, Stones-Havas S, Sturrock S, Swidan F, Thierer T, Wilson A. Geneious v5.6. New Zealand: Biomatters; 2012. Available from: http://www. geneious.com
  • Eigenmann CH. The Cheirodontinae, a subfamily of minute characid fishes of South America. Memoirs of the Museum of Comparative Zoology. 1915; 7(1):1-100.
  • Excoffier L, Lischer HEL. Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour. 2010, Mar; 10(3):564- 67. Available from: http://dx.doi.org/10.1111/j.1755- 0998.2010.02847.x
  • Fink WL, Weitzman SH. The so-called cheirodontin fishes of Central America with descriptions of two new species (Pisces: Characidae). Washington (DC): Smithsonian Institution Press; 1974. (Smithsonian contributions to Zoology; No. 172).
  • Fontana CS, Bencke GA, Reis, RE. Livro vermelho da fauna ameacada de extincao no Rio Grande do Sul. Porto Alegre: Edipucrs; 2003.
  • Gery J. Characoids of the world. Neptune City, New Jersey: T. F. H. Publications; 1977.
  • Gomes AL. A small collection of fishes from Rio Grande do Sul, Brazil. Ann Arbor: University of Michigan Press; 1947. (Miscellaneous Publications, Museum of Zoology, University of Michigan; No. 67).
  • Giraudoux P. Data analysis in ecology: package 'pgirmess'. Repository CRAN; 2013.
  • Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 1999; 41:95-8.
  • Hammer O, Harper DAT, Ryan PD. PAST: Paleontological statistics software package for education and data analysis. Palaeontol Electron. 2001; 4(1):1-9.
  • Hirschmann A, Thomaz AT, Malabarba LR, Fagundes NJR. Riverine habitat specificity constrains dispersion in a Neotropical fish (Characidae) along Southern Brazilian drainages. Zool Scr. 2015, Feb; 44(4):374-82. Available from: http://dx.doi.org/10.1111/zsc.12106
  • Javonillo R, Malabarba LR, Weitzman SH, Burns JR. Relationships among major lineages of characid fishes (Teleostei: Ostariophysi: Characiformes), based on molecular sequence data. Mol Phylogenet Evol. 2010; 54(2):498-511. Available from: http://dx.doi.org/10.1016/j.ympev.2009.08.026
  • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol. 1980, Jun; 16(2):111-20.
  • Lanfear R, Calcott B, Ho SYW, Guindon S. PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol Biol Evol. 2012; 29(6):1695-1701. Available from: http://dx.doi.org/10.1093/ molbev/mss020
  • Li C, Orti G, Zhang G, Lu G.A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study. BMC Evol Biol. 2007; 7:44[11p.]. Available from: http://dx.doi.org/10.1186/1471-2148-7-44
  • Li WLS, Drummond AJ. Model averaging and Bayes factor calculation of relaxed molecular clocks in Bayesian phylogenetics. Mol Biol Evol. 2011, Sep; 29(2):751-61. Available from: http://dx.doi.org/10.1093/molbev/msr232
  • Librado P, Rozas J. DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics. 2009; 25(11):1451-52. Available from: http://dx.doi.org/10.1093/ bioinformatics/btp187
  • Lucena CAS. Revisao e redefinicao do genero neotropical Charax Scopoli, 1777 com a descricao de quatro especies novas (Pisces; Characiformes; Characidae). Com Mus Cienc Tecnol PUCRS. 1987; 40:5-124.
  • Lucena CAS, Lucena ZMS. Redefinicao do genero Deuterodon Eigenmann, 1907 (Ostariophysi: Characiformes: Characidae). Com Mus Cienc Tecnol PUCRS. 2002; 15(1): 113-35.
  • Malabarba LR. Monophyly of the Cheirodontinae, characters and major clades (Ostariophysi: Characidae). In: Malabarba LR, Reis RE, Vari RP, Lucena ZMS, Lucena C AS, editors. Phylogeny and classification of Neotropical fishes. Porto Alegre: Edipucrs; 1998. p.193-233.
  • Malabarba LR, Isaia EA. The fresh water fish fauna of the rio Tramandai drainage, Rio Grande do Sul, Brazil, with a discussion of its historical origin. Com Mus Cienc Tecnol PUCRS. 1992; 5(1):197-223.
  • Malabarba LR, Neto PC, Bertaco VA, Carvalho TP, Santos JF, Artioli LGS. Guia de identificacao dos peixes da bacia do rio Tramandai. Porto Alegre: Via Sapiens; 2013.
  • Malabarba LR, Weitzman SH. Description of a new genus with six new species from southern Brazil, Uruguay and Argentina, with a discussion of a putative characid clade (Teleostei: Characiformes: Characidae).Com Mus Cienc Tecnol PUCRS.2003; 16(1):67-151.
  • Marques AAB, Fontana CS, Velez E, Bencke GA, Schneider M, Reis RE. Lista das Especies de Fauna Ameacadas de Extincao no Rio Grande do Sul. Decreto no 41.672 de 11 de junho de 2002. Porto Alegre: FZB/MCT/ PUCRS/PANGEA; 2002.
  • Medrano JF,Aasen E, Sharrow L. DNA extraction from nucleated red blood cells. Biotechniques. 1990; 8(1):43.
  • Menezes NA, Weitzman SH, Quagio-Grassiotto I. Two new species and a review of the inseminating freshwater fish genus Monotocheirodon (Characiformes: Characidae) from Peru and Bolivia. Pap Avulsos Zool. 2013; 53(10):129-44. Available from: http://dx.doi.org/10.1590/S0031-10492013001000001
  • Miller KG, Mountain GS, Wright JD, Browning JV. A 180-millionyear record of sea level and ice volume variations from continental margin and deep-sea isotopic records. Oceanography. 2011; 24(2):40-53. Available from: http://dx.doi.org/10.5670/ oceanog.2011.26
  • Mirande JM. Phylogeny of the family Characidae (Teleostei: Characiformes): from characters to taxonomy. Neotrop Ichthyol. 2010; 8(3):385-568. Available from: http://dx.doi.org/10.1590/ S1679-62252010000300001
  • Ministerio do Meio Ambiente (MMA). Lista Nacional das Especies da fauna brasileira ameacadas de extincao. 2014.Available from: http://www.icmbio.gov.br/portal/biodiversidade/fauna-Brasileira /60-fauna-brasileira/2741-Lista-de-Especies Ameacadas-saibamais.html
  • Nabholz B, Glemin S, Galtier N. Strong variations of mitochondrial mutation rate across mammals - the longevity hypothesis. Mol Biol Evol. 2008; 25(1):120-30. Available from: http://dx.doi. org/10.1093/molbev/msm248
  • Nabholz B, Glemin S, Galtier N. The erratic mitochondrial clock: variations of mutation rate, not population size, affect mtDNA diversity across birds and mammals. BMC Evol Biol. 2009; 9(1):54 [13p.]. Available from: http://dx.doi.org/10.1186/1471- 2148-9-54
  • Netto-Ferreira AL, Birindelli JLO, de Sousa LM, Mariguela TC, Oliveira C. A new miniature characid (Ostariophysi: Characiformes: Characidae), with phylogenetic position inferred from morphological and molecular data. PLoS ONE. 2013; 8:e52098 [7p.]. Available from: http://dx.doi.org/10.1371/ journal.pone.0052098
  • Netto-Ferreira AL, Birindelli JLO, Sousa LM, Menezes NA. A new species of Rhinopetitia Gery 1964 (Ostariophysi: Characiformes: Characidae) from the rio Teles Pires, rio Tapajos basin, Brazil. J Fish Biol. 2014; 84(5):1539-50. Available from: http://dx.doi. org/10.1111/jfb.12384
  • Oliveira C, Avelino GS, Abe KT, Mariguela TC, Benine RC, Orti G, Vari RP, Castro RMC. Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling. BMC Evol Biol. 2011; 11:275 [25p.]. Available from: http://dx.doi.org/10.1186/1471-2148-11-275
  • Ornelas-Garcia CP, Dominguez-Dominguez O, Doadrio I. Evolutionary history of the fish genus Astyanax Baird & Girard (1854) (Actinopterygii, Characidae) in Mesoamerica reveals multiple morphological homoplasies. BMC Evol Biol. 2008; 8:340[17p.]. Available from: http://dx.doi.org/10.1186/1471- 2148-8-340
  • de Pinna MCC. Concepts and tests of homology in the cladistic paradigm. Cladistics. 1991; 7(4):367-94.
  • R Development Core Team. R: a language and environment for statistical computing [Computer software manual - Internet]. Vienna: R Foundation for Statistical Computing; 2013. Available from: https://www.rproject.org/
  • Rambaut A, Drummond AJ. Tracer v1.5. 2009. Available from: http://beast.bio.ed.ac.uk/Tracer
  • Reeves RGUY, Bermingham E. Colonization, population expansion, and lineage turnover: phylogeography of Mesoamerican characiform fish. Biol J Linn Soc. 2006; 88(2):235-55. Available from: http://dx.doi.org/10.1111/ j.1095-8312.2006.00619.x
  • Reis RE, Lucena ZMS, Lucena CAS, Malabarba LR. Peixes. In: Fontana CS, Bencke GA, Reis RE, editors. Livro vermelho da fauna ameacada de extincao no Rio Grande do Sul. Porto Alegre: Edipucrs; 2003. p.117-46.
  • RibeiroAC. Tectonic history and the biogeography of the freshwater fishes from the coastal drainages of eastern Brazil: an example of faunal evolution associated with a divergent continental margin. Neotrop Ichthyol. 2006; 4(2):225-46. Available from: http://dx.doi.org/10.1590/S1679-62252006000200009
  • Rio Grande do Sul. Decreto N.º 51.797. Porto Alegre: DOE n.º 173; 2014 [2014 Sep 09].
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: Molecular Evolutionary Genetics Analysis (MEGA) software version 6.0. Mol Biol Evol. 2013; 30(12):2725-29. Available from: http://www.megasoftware.net
  • Taylor WR, Van Dyke GC. Revised procedures for staining and clearing small fishes and other vertebrates for bone and cartilage. Cybium. 1985; 9(2):107-19.
  • Thomaz AT, Arcila D, Orti G, Malabarba LR. Molecular phylogeny of the subfamily Stevardiinae Gill, 1858 (Characiformes: Characidae): classification and the evolution of reproductive traits. BMC Evol Biol. 2015a; 15:146 [25p.]. Available from: http://dx.doi.org/10.1186/s12862-015-0403-4
  • Thomaz AT, Malabarba LR, Bonatto SL, Knowles LL. Testing the effect of palaeodrainages versus habitat stability on genetic divergence in riverine systems: study of a Neotropical fish of the Brazilian coastal Atlantic Forest. J Biogeogr. 2015b; 42(12):2389-2401. Available from: http://dx.doi.org/10.1111/ jbi.12597
  • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994; 22(22):4673- 80.
  • Tringali MD, Bert TM, Seyoum S, Bermingham E, Bartolacci D. Molecular phylogenetics and ecological diversification of the transisthmian fish genus Centropomus (Perciformes: Centropomidae). Mol Phylogenet Evol. 1999; 13(1):193-207. Available from: http://dx.doi.org/10.1006/mpev.1999.0624
  • Vogel C. Estrategias de historia de vida de peixes neotropicais em diferentes tipos de habitat. [MSc Dissertation on the Internet]. Porto Alegre: Universidade Federal do Rio Grande do Sul; 2012.Available from: Repositorio Digital Universidade Federal do Rio Grande do Sul. http://hdl.handle.net/10183/60554
  • Weitzman SH, Fink WL. Relationships of the neon tetras, a group of South American freshwater fishes (Teleostei, Characidae) with comments on the phylogeny of new world Characiforms. Bull Mus Comp Zool. 1983; 150(6):339-95.
  • Weitzman SH, Fink SV. Xenurobryconin phylogeny and putative pheromone pumps in glandulocaudine fishes (Teleostei: Characidae). Washington (DC): Smithsonian Institution Press; 1985. (Smithsonian contributions to Zoology; No. 421).
  • Weitzman SH, Palmer L. A new species of Hyphessobrycon (Teleostei: Characidae) from the Neblina region of Venezuela and Brazil, with comments on the putativerosy tetra clade. Ichthyol Explor Freshw. 1997; 7(3/4):209-42.
  • Zelditch ML, Fink WL. Heterochrony and heterotopy: stability and innovation in the evolution of form. Paleobiology. 1996; 22(2): 241-54.