LSMBO/brownotate-app: Brownotate-app-1.4.0

RNA-seq

• Added RNA-seq support in the search workflow.
• Users can now select RNA-seq specific options before launching a search.
• RNA-seq datasets are handled more cleanly in the annotation pipeline.

Database Search

• Added a new "past database searches" view so users can reopen previous searches quickly.
• Improved RNA-seq search support with new DB search parameters for RNA-seq datasets.
• Search results are easier to use for long-read and RNA-seq data.

Brownaming

• Added a new Brownaming page for dedicated protein naming and annotation steps.
• This page lets users run Brownaming separately from the full annotation workflow.
• It makes protein name assignment more direct and easier to manage.

Stability and usability

• Improved reliability for long-running annotation jobs.
• Better error handling and smoother resume behavior for running tasks.