Reproducibility package for rsx: a high-performance streaming toolkit for RAD-seq sex determination

Reproducibility payload for the rsx BMC Bioinformatics submission, regenerated for rsx-rs v0.2.3. The deposit contains: (1) rsx_bmc_repro_archive_20260604.tar.xz, the self-contained pixi + Snakemake workflow that clones rsx-rs at the pinned v0.2.3 tag, builds rsx, the C++ RADSex v1.2.0 reference, and the pyrsx bindings, and regenerates every figure and data table in the paper (synthetic regression suite; the four-panel literature benchmark with all 56 paired command/dataset/depth timings including the depth command; Bayesian evidence; mode and QC effects; biological unlocks, sex-system inference and candidate triage; the prior x linked-probability triage grid and heatmap; the low-depth sweep and depth-stability summary; and Python-bindings parity); and (2) the complete downloaded literature benchmark data archive (FASTQ samples, regenerated marker-table workdirs, per-dataset logs and comparisons). All benchmark timings were produced on an AMD Ryzen Threadripper PRO 3955WX workstation (16 threads) and scale with host hardware.