Published June 2, 2026 | Version v0.8.0
Software Open

FungalMorphoSpace: A reaction-diffusion simulator for exploring fungal hymenophore morphogenesis

Authors/Creators

Description

Open-source Python package for simulating Gierer-Meinhardt reaction-diffusion patterns of fungal hymenophores and quantifying them with a morphometric and topological analysis suite (FFT/autocorrelation wavelength with quality control, Euler characteristic, connected-component spacing). Includes calibrated presets for three polypore species, a contract-enforced reproducible output schema, and a three-node (immobile-node) module with an analytical linear-stability utility. Released to accompany the SoftwareX submission.

Files

mahumadad/FungalMorphoSpace-v0.8.0.zip

Files (1.4 MB)

Name Size Download all
md5:bc9ebdedca336d7de61113f8a50ed04b
1.4 MB Preview Download

Additional details

Related works