Published June 2, 2026 | Version v0.0.12
Software Open

TheDeanLab/navigate: v0.0.12

Authors/Creators

  • 1. University of Texas Southwestern Medical Center
  • 2. University of Vienna
  • 3. Atmos Energy
  • 4. UT Southwestern Medical Center
  • 5. UTSW Medical Center

Description

What's Changed

  • Increase testing coverage by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1200
  • Support Piezo as stage by @Johnhaug223 in https://github.com/TheDeanLab/navigate/pull/1198
  • Stabilize LUT rendering and improve MIP projection handling by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1203
  • Uniform padding by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1202
  • 1186 remove channel settings widgets if not necessary by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1190
  • Add ASI PLC control logic docs and images by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1204
  • stage connection images by @joelaugustine099 in https://github.com/TheDeanLab/navigate/pull/1206
  • Add targeted coverage tests for tools and core helpers by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1208
  • Getting Photometrics and ImagineOpticsMirror to work with multiple defined scopes in configuration.yaml by @conorhughmcfadden in https://github.com/TheDeanLab/navigate/pull/1210
  • Clarify PI stage motor axis ordering in documentation by @annie-xd-wang in https://github.com/TheDeanLab/navigate/pull/1215
  • Asi stage updates by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1216
  • set up z-stack start and end positions according to primary z axis by @annie-xd-wang in https://github.com/TheDeanLab/navigate/pull/1211
  • Show default feature when adding a new feature pipeline by @annie-xd-wang in https://github.com/TheDeanLab/navigate/pull/1218
  • Adjust tissue detection calculation for stacks by @annie-xd-wang in https://github.com/TheDeanLab/navigate/pull/1219
  • Fix stage position dictionary mutation issue by @annie-xd-wang in https://github.com/TheDeanLab/navigate/pull/1220
  • Add KINESIS stage + new galvo waveforms and tests by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1176
  • Document DAQ trigger reset configuration by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1221
  • Constrain stack ranges to stage limits by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1222
  • simple dependency fix by @annie-xd-wang in https://github.com/TheDeanLab/navigate/pull/1223
  • Fix BDV N5 setup over-allocation by @AdvancedImagingUTSW in https://github.com/TheDeanLab/navigate/pull/1207
  • fix loading crash caused by broken plugins by @annie-xd-wang in https://github.com/TheDeanLab/navigate/pull/1224

Full Changelog: https://github.com/TheDeanLab/navigate/compare/v0.0.11...v0.0.12

Files

TheDeanLab/navigate-v0.0.12.zip

Files (61.9 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/TheDeanLab/navigate/tree/v0.0.12 (URL)

Software

Repository URL
https://github.com/TheDeanLab/navigate