Published June 1, 2026 | Version v1

SCIENCE BFSP CoS | WP3 | M3.4 Data from MGnify with computational resources used for metagenomics assembly

Authors/Creators

  • 1. ROR icon University of Freiburg

Description

This work package aims to streamline the allocation of computational resources for metagenomic assemblies by analyzing input data characteristics and developing a machine learning model to predict resource requirements. To support this effort, EMBL-EBI has generously provided data on the computational demands—specifically peak memory usage—of assemblies generated using the MGnify pipeline.

Files

SCIENCE_BFSP_M3.4.pdf

Files (254.5 kB)

Name Size Download all
md5:2c5eba2dbf1ff6e4dd0385efe3646f8b
254.5 kB Preview Download

Additional details

Funding

European Commission
ELIXIR - European Life-science Infrastructure for Biological Information 211601