Published May 26, 2026
| Version v1
Dataset
Open
BCR + GEX Tutorial Dataset: Single-cell BCR and gene expression data from tumor-draining lymph node and primary tumor of an ovarian cancer patient
Authors/Creators
Description
Analysis-ready single-cell BCR and gene expression data from one ovarian cancer patient, used in the BCR + GEX Integration Tutorial. The dataset includes paired lymph node (P1_LN) and primary tumor (P1_PT) samples from the same patient, originally published in Nathan et al. (2026, Immunity).
Files include Cell Ranger GEX output (.h5), BCR sequence data (AIRR-format TSV), processed BCR data (bcr_data.tsv), and an annotated integrated Seurat object (RDS). These files serve as input and checkpoint files for the three-part tutorial hosted here.
Raw sequencing data are available on GEO under accession GSE319733.
Files
P1_LN_filtered_contig_annotations.csv
Files
(184.5 MB)
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