Published May 15, 2026
| Version Optimus_v9.0.0
Software
Open
github.com/broadinstitute/warp/scANVI
Authors/Creators
Description
Pipeline for cell type label transfer on Multiome data using SCVI and SCANVI models. Integrates single-cell RNA (GEX) and ATAC data with an annotated reference to transfer cell type labels via semi-supervised deep generative models.
Files
github.com-broadinstitute-warp-scANVI_Optimus_v9.0.0.zip
Files
(7.5 kB)
| Name | Size | Download all |
|---|---|---|
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md5:588e4fd0ac799161ab415e0330919410
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Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.20218729 (URL)
- https://dockstore.org/workflows/github.com/broadinstitute/warp/scANVI:Optimus_v9.0.0 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fwarp%2FscANVI/versions/Optimus_v9.0.0/PLAIN-WDL/descriptor/scANVI.wdl (URL)