Published May 14, 2026 | Version v1
Dataset Open

Path2Space — demo data (HEST NCBI776 Visium slide)

Authors/Creators

Description

Demo input data for the Path2Space companion notebook (github.com/eldadshulman/path2space-companion).

Contents:

  • NCBI776.tif — H&E image of the NCBI776 breast Visium sample.
  • NCBI776_spots.pkl — pickled DataFrame of spot pixel coordinates (Visium tissue-positions).
  • MD5SUMS.txt — checksums.

Source: HEST-1k release (huggingface.co/datasets/MahmoodLab/hest), MIT license. Redistributed here for convenience as a one-click demo input.

Companion paper: Shulman et al., Cell 2026. doi:10.1016/j.cell.2026.04.023

Files

MD5SUMS.txt

Files (903.8 MB)

Name Size
md5:4a41ebb45fc720730faa106a2388ac3f
98 Bytes Preview Download
md5:5a515ef4c785721a9a5c51b062ea4a7c
903.4 MB Preview Download
md5:1cd56ee7813670864d6c23954f0d3d34
429.7 kB Download

Additional details

Related works

Is part of
Software: 10.5281/zenodo.20172521 (DOI)
Is source of
Dataset: 10.5281/zenodo.20174301 (DOI)
Is supplement to
Journal article: 10.1016/j.cell.2026.04.023 (DOI)