Published 2026 | Version v2

RNApedia: A Database for Structural Protein–RNA Interactions

  • 1. ROR icon Universidade Federal de Minas Gerais

Description

RNApedia is a comprehensive and curated database of experimentally determined protein-RNA complex structures derived from the Protein Data Bank (PDB). The resource integrates structural, molecular, and interaction information for protein-RNA pairs, including RNA type classification, sequence characteristics, structural resolution, experimental methods, protein domain annotations, RNA modifications, and protein-RNA contact statistics.

RNApedia aims to support structural, functional, and computational studies of protein-RNA interactions by providing standardized annotations and ready-to-use datasets for large-scale analyses, performance comparison, and method development.

Files

affinity.zip

Files (35.7 GB)

Name Size
md5:b5ced98e8150d6effc6eb3904e55bce2
250.9 MB Preview Download
md5:d7dd3c475ac0edbc97e2862a672cdf8e
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Additional details

Funding

Fundação de Amparo à Pesquisa do Estado de Minas Gerais
Coordenação de Aperfeicoamento de Pessoal de Nível Superior
National Council for Scientific and Technological Development

Dates

Available
2026-02-23
Dataset publicly released

Software

Repository URL
https://bioinfo.dcc.ufmg.br/rnapedia3/
Programming language
Python , HTML+PHP
Development Status
Active