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Published December 12, 2016 | Version v1.13.3

broadinstitute/viral-ngs: v1.13.3

  • 1. Broad Institute of MIT and Harvard
  • 2. MIT
  • 3. The Scripps Research Institute
  • 4. DNAnexus

Description

A set of scripts and tools for the analysis of viral NGS data.

More detailed documentation can be found at http://viral-ngs.readthedocs.org/ This includes installation instructions, usage instructions for the command line tools, and usage of the pipeline infrastructure.

v.1.13.3 Release Notes

Fixed:

  • the vphaser2 step is now hardened against empty input resulting from removal of doubly-mapped reads; in such cases, a blank vphaser output file is now created, allowing the pipeline to continue

Files

broadinstitute/viral-ngs-v1.13.3.zip

Files (46.3 MB)

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Additional details