Published May 5, 2026
| Version v1.0.0
Software
Open
github.com/yuhanhsu/wf-taplin-download/taplin-download
Authors/Creators
Description
wf-taplin-download
Files for collecting MS data files from Taplin server
- Python script (downloadTaplinData.py) to login and download data from Taplin server
- Dockerfile to containerize the Python script and install dependencies (with gcloud CLI)
- cloudbuild.yaml to build and push docker image to Google Artifact Registry via Cloud Build
- taplin-download.wdl to define the workflow to be run:
- download and upload data to a google bucket
- check integrity of downloaded .raw file using msconvert (separate docker from Docker Hub)
- .dockstore.yml to sync workflow WDL to Dockstore
Terra workflow run time: ~15 minutes
Files
github.com-yuhanhsu-wf-taplin-download-taplin-download_v1.0.0.zip
Files
(1.6 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:414f43ef14b03290f5386a4b14445e28
|
1.6 kB | Preview Download |
Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.20040191 (URL)
- https://dockstore.org/workflows/github.com/yuhanhsu/wf-taplin-download/taplin-download:v1.0.0 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fyuhanhsu%2Fwf-taplin-download%2Ftaplin-download/versions/v1.0.0/PLAIN-WDL/descriptor/taplin-download.wdl (URL)