dggs-biodiversity-bias — why equal-area cells matter for biodiversity (and why DGGS adds shape and hierarchy)
Description
Supporting evidence for the EGU 2026 talk EGU26-11348 (Fouilloux et al., LifeWatch ERIC, ESSI2.6, 3–8 May 2026).
This release expands the v0.1.0 evidence base from a 3-grid comparison (lat-lon vs Behrmann vs HEALPix) to a comprehensive 7-grid evaluation across every grid family the biodiversity community uses in practice, and isolates HEALPix-specific advantages for the integration of biodiversity science with Copernicus Earth-observation data and Destination Earth climate models.
The eight-notebook argument
- Equal-area is necessary. Lat-lon over-counts biodiversity by up to 23× at 5° resolution, purely from cell geometry (notebooks 01–02).
- Six equal-area choices pass the count test. HEALPix, H3, rHEALPix, ISEA3H, Mollweide, and the EEA reference grid (LAEA Europe / EPSG:3035, the INSPIRE / Habitats Directive standard) all agree on biodiversity density patterns over Quercus suber's Mediterranean range. For biodiversity counts in isolation, the choice between them is not a count-correctness question (notebook 07).
- DGGS family preserves cell shape across latitudes; projection family does not. Behrmann, Mollweide, and the EEA reference grid distort poleward at high latitudes; HEALPix, H3, rHEALPix, and ISEA3H all preserve compact cells everywhere — the property that makes ML kernels mean the same geographic operator on every part of Earth (notebooks 03–04).
- HEALPix is the right common DGGS for the integrated future of biodiversity science with high-resolution Copernicus EO and Destination Earth climate models, by virtue of: native geometric deep learning on the sphere (DeepSphere, spherical CNNs); scattering networks via
foscat(the FIESTA stack); native sphere-harmonic transforms (healpy.map2alm/alm2map); NESTED bit-shift hierarchical refinement (zoom is O(1) per cell); iso-latitude pixelization for zonal climate-zone analyses; and a credible ellipsoidally-correct path via rHEALPix or "Ellipsoidal HEALPix" (the ESA GRID4EARTH approach). For pure biodiversity-only work at coarse resolution, sphere HEALPix is fine; for the integration regime, ellipsoidal correctness becomes material (notebooks 06, 08).
Connection to ESA GRID4EARTH
This Jupyter Book is the biodiversity-side version of the case ESA GRID4EARTH makes for Ellipsoidal HEALPix as a Common DGGS for Copernicus EO and Destination Earth — bridging spherical climate models and ellipsoidal Earth-observation data on a single ellipsoidally-correct, hierarchical, scalable DGGS.
Cite
If you use this work please cite this release (DOI minted by Zenodo upon publication) and the foundational references in `CITATION.cff`: Górski et al. 2005 (HEALPix), Sahr et al. 2003 (DGGS), Hauffe et al. 2023 (DGGS for biodiversity), Kmoch et al. 2022 (DGGS area distortions).
Notes
Files
annefou/dggs-biodiversity-bias-v0.2.0.zip
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Additional details
Related works
- Is supplement to
- Software: https://github.com/annefou/dggs-biodiversity-bias/tree/v0.2.0 (URL)
Software
- Repository URL
- https://github.com/annefou/dggs-biodiversity-bias