Published April 30, 2026
| Version 4.0.62
Software
Open
github.com/broadinstitute/long-read-pipelines/QCAssessmentDepthBased
Authors/Creators
Description
Assess quality metrics from mosdepth coverage and callable loci data to determine pass/fail status. To pass, the fraction of callable bases must be greater than min_callable_fraction and at least min_coverage_threshold_regions fraction of the genome must have a coverage depth greater than min_coverage.
Files
github.com-broadinstitute-long-read-pipelines-QCAssessmentDepthBased_4.0.62.zip
Files
(12.4 kB)
| Name | Size | Download all |
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md5:45b85b4cdf2bb27bbea75697456795d3
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12.4 kB | Preview Download |
Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.19919165 (URL)
- https://dockstore.org/workflows/github.com/broadinstitute/long-read-pipelines/QCAssessmentDepthBased:4.0.62 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Flong-read-pipelines%2FQCAssessmentDepthBased/versions/4.0.62/PLAIN-WDL/descriptor/QCAssessmentDepthBased.wdl (URL)