Published April 12, 2026
| Version v1
Dataset
Open
Metagenomic assemblies from real environmental samples for binning benchmarking
Authors/Creators
Description
This dataset consists of metagenomic assemblies from three environments: black soil, human gut (Honduras), and neonatal gut. It includes contigs assembled through coassembly and sample-wise assembly:
*_pooledcontigs.fa.tar.gz: coassemblies generated by pooling reads from all samples within each dataset.*_samplewise_contigs.fa.tar.gz: assemblies generated individually for each sample and concatenated into a single file. Fasta header is formatted as<sampleid>C<contigid>.
All files are provided in FASTA format and provided as compressed .tar.gz archives.
Files
Files
(6.3 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:dc84d5c2dd3434366d10122d49dbcef9
|
523.8 MB | Download |
|
md5:97ed4bdb429f1bd07b7701d17cbe148b
|
2.3 GB | Download |
|
md5:95531d830936c33ca7717b16d3a912cf
|
608.6 MB | Download |
|
md5:4bc5e103f13bab4e3e488e00d1c5dcb4
|
2.1 GB | Download |
|
md5:ad042f0611bd9c6249891d24c8e277f7
|
247.9 MB | Download |
|
md5:29e83d38438d1c5bd69d33961781a157
|
446.4 MB | Download |
Additional details
Related works
- Is published in
- Publication: 10.1093/bioinformatics/btaf538 (DOI)
- Publication: 10.1093/bib/bbaf617 (DOI)
Funding
Software
- Repository URL
- https://github.com/soedinglab/MAGmax
- Programming language
- Rust
- Development Status
- Active