Published April 10, 2026 | Version v1
Dataset Open

Cell feature HistDiff scores for CP screen A549 PMA

Description

This is a full CP screen dataset of Phenix microscopy quantifications performed in Harmony and analyzed by HistDiff. It corresponds to an article in Nature Communications, first made available as a bioRxiv at https://doi.org/10.1101/2025.05.23.655853. Additional information is available here: DOI:10.5281/zenodo.19500370. For scripts, see: https://doi.org/10.5281/zenodo.19410518 (https://github.com/LokeyLab/QCGauntlet) and https://doi.org/10.5281/zenodo.19410007 (https://github.com/LokeyLab/HistDiff_standalone). 

Files

Compounds HistDiff scores for all collected cell features.zip

Files (4.1 GB)

Additional details

Identifiers

Other
RRID:SCR_021114

Related works

Is described by
Preprint: 10.1101/2025.05.23.655853 (DOI)
Is supplemented by
Dataset: 10.5281/zenodo.19500370 (DOI)

Funding

National Institutes of Health
NCRR: UCSC Integrated Small Molecule Screening Facility 1S10RR022455-01A1
National Institutes of Health
Upgrade of core imaging instrumentation and robotics for the UCSC Chemical Screening Center 1S10OD028730-01A1
National Institutes of Health
Center for High Content Functional Annotation of Natural Products U41AT008718