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Published April 7, 2026 | Version v2.2.3
Software Open

gustaveroussy/sopa: v2.2.3

Authors/Creators

  • 1. Cure51 and Gustave Roussy Institute
  • 2. CentraleSupélec
  • 3. GénomiqueENS
  • 4. @quadbio
  • 5. Theodo GovTech
  • 6. MSK
  • 7. @ScilifelabDataCentre

Description

Added

  • Nimbus support for denoised channel aggregation by @alihamraoui in https://github.com/gustaveroussy/sopa/pull/404

Changed

  • Cleanup: keep only cellpose deps in cellpose extra by @quentinblampey in https://github.com/gustaveroussy/sopa/pull/408

Fixed

  • Add again drop_threshold in sopa.segmentation.tissue by @quentinblampey in https://github.com/gustaveroussy/sopa/pull/406
  • Fixed a bug in sopa.aggregate introduced in v2.2.2 due to the recent refactoring by @quentinblampey

Full Changelog: https://github.com/gustaveroussy/sopa/compare/v2.2.2...v2.2.3

Files

gustaveroussy/sopa-v2.2.3.zip

Files (16.2 MB)

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md5:60de8fb87646c4db20b292eff266d158
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Additional details

Related works

Is supplement to
Software: https://github.com/gustaveroussy/sopa/tree/v2.2.3 (URL)

Software

Repository URL
https://github.com/gustaveroussy/sopa