There is a newer version of the record available.

Published April 2, 2026 | Version v3.0.11
Software Open

broadinstitute/viral-ngs: v3.0.11

Authors/Creators

  • 1. Broad Institute
  • 2. MIT
  • 3. Merck
  • 4. DynoTx
  • 5. Khipu Genomics
  • 6. Novo Nordisk
  • 7. @broadinstitute

Description

What's Changed

  • Add modular agent skills framework by @dpark01 in https://github.com/broadinstitute/viral-ngs/pull/1054
  • Fix tag cleanup to prevent cascade deletion of shared-digest images by @dpark01 in https://github.com/broadinstitute/viral-ngs/pull/1055
  • Bump pyopenssl conda pin to >=26.0.0 by @dpark01 in https://github.com/broadinstitute/viral-ngs/pull/1056
  • Enforce Trivy severity filter on SARIF output and fail CI on findings by @dpark01 in https://github.com/broadinstitute/viral-ngs/pull/1057
  • Fix CVE-2026-33210: upgrade Ruby json gem in assemble, phylo, and mega images by @dpark01 in https://github.com/broadinstitute/viral-ngs/pull/1058
  • Add rasusa-based coverage normalization for assembly polishing by @dpark01 in https://github.com/broadinstitute/viral-ngs/pull/1059

Full Changelog: https://github.com/broadinstitute/viral-ngs/compare/v3.0.10...v3.0.11

Files

broadinstitute/viral-ngs-v3.0.11.zip

Files (12.1 MB)

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md5:68b4fc90b4e11517afa28fed45cc9424
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Additional details

Related works

Is supplement to
Software: https://github.com/broadinstitute/viral-ngs/tree/v3.0.11 (URL)

Software

Repository URL
https://github.com/broadinstitute/viral-ngs