Generic revision on the Biwia– Microphysogobio complex (Cypriniformes, Gobionidae) with descriptions of three new genera
Authors/Creators
- 1. Chinese Academy of Sciences, Beijing, China|Shanghai Ocean University, Shanghai, China
- 2. Shanghai Ocean University, Shanghai, China
- 3. Chinese Academy of Sciences, Beijing, China
Description
The Biwia–Microphysogobio complex, comprising several genera and over 40 valid species, is widely distributed in the freshwater systems of East Asia. Although many species of this complex have been discovered in the past decades, controversy regarding the taxonomic status of these genera still remains. This study revised the Biwia–Microphysogobio complex at the generic level. Based on the morphology of the type species in each genus and various species within this complex, the genus characteristics are described. The morphology of the lip papillae pattern, jaws, and air bladder chambers are key characteristics used to distinguish the genera. With further evidence supported by the molecular phylogenetic relationships reconstructed from mitochondrial genome sequences, each genus in this complex formed a monophyletic group. The previously polyphyletic Microphysogobio is now separated into four genera, rendering the newly defined genus Microphysogobio monophyletic. The other three genera are newly described, i.e., Crossocheilogobio, Mesophysogobio, and Oriengobio. Along with Biwia, Huigobio, and Platysmacheilus, the complex now includes seven genera. The distribution of each genus is mapped separately in this study. A diagnostic key to genera is provided, and species included in each genus are listed. Sixteen new combinations are generated in this study.
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References
- Allio R, Schomaker‐Bastos A, Romiguier J, Prosdocimi F, Nabholz B, Delsuc F (2020) MitoFinder: Efficient automated large‐scale extraction of mitogenomic data in target enrichment phylogenomics. Molecular Ecology Resources 20(4): 892–905. https://doi.org/10.1111/1755-0998.13160
- Bǎnǎrescu PM, Nalbant TT (1966) Revision of the genus Microphysogobio (Pisces, Cyprinidae). Vestnik Ceskoslovenske Spolecnosti Zoolpgicke 30: 194–209.
- Bǎnǎrescu PM, Nalbant TT (1973) Pisces, Teleostei, Cyprinidae (Gobioninae). Das Tierreich 93: 1–304.
- Burton M (1934) Pisces section. Zoological Record 70: 1–63. https://doi.org/10.1017/S0032247400030771
- Chen L, Zhang XY, Liu HZ (2023) Phylogenetic Relationships of the Pseudogobionini Group (Teleostei: Cyprinidae) with Selection Pressure Analyses to Genes of Mitochondrial Genome. Fishes 8(4): e201. https://doi.org/10.3390/fishes8040201
- Fang PW (1938) On Huigobio chenhsienensis, gen. & sp. nov. Bulletin of the Fan Memorial Institute of Biology. Peiping 8: 237–243. [Zoological Series]
- Felsenstein J (1978) Cases in which Parsimony or Compatibility Methods with be Positively Misleading. Systematic Biology 27(4): 401–410. https://doi.org/10.1093/sysbio/27.4.401
- Fricke R, Eschmeyer WN, van der Laan R [Eds] (2024) Eschmeyer's catalog of fishes: Genera, species, references. http://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp
- He H, Li YH, Cao K, Li MY, Fu CZ (2017) Taxonomy and phylogenetic relationships of the genus Abbottina fishes in the subfamily Gobioninae. Shui Sheng Sheng Wu Hsueh Bao 41: 843–852.
- Hosoya K (1986) Interrelationships of the Gobioninae (Cyprinidae). In: Uyeno T, Arai R, Taniuchi T, Matsuura K (Eds) Indo-Pacific Fish Biology. The Ichthyological Society of Japan,Tokyo.
- Huang SP, Chen IS, Shao KT (2016) A new species of Microphysogobio (Cypriniformes: Cyprinidae) from Fujian Province, China, and a molecular phylogenetic analysis of Microphysogobio species from southeastern China and Taiwan. Proceedings of the Biological Society of Washington 129(1): 195–211. https://doi.org/10.2988/0006-324X-129.Q3.195
- Jiang ZG, Zhang E (2013) Molecular evidence for taxonomic status of the gudgeon genus Huigobio Fang, 1938 (Teleostei: Cypriniformes), with a description of a new species from Guangdong Province, South China. Zootaxa 3731(1): 171–182. https://doi.org/10.11646/zootaxa.3731.1.8
- Jiang ZG, Gao EH, Zhang E (2012) Microphysogobio nudiventris, a new species of gudgeon (Teleostei: Cyprinidae) from the middle Chang-Jiang (Yangtze River) basin, Hubei Province, South China. Zootaxa 3586(1): 211–221. https://doi.org/10.11646/zootaxa.3586.1.19
- Jordan DS, Fowler HW (1903) A review of the Cyprinoid fishes of Japan. Proceedings of the United States National Museum 26(1334): 811–862. https://doi.org/10.5479/si.00963801.26-1334.811
- Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS (2017) ModelFinder: Fast Model Selection for Accurate Phylogenetic Estimates. Nature Methods 14(6): 587–589. https://doi.org/10.1038/nmeth.4285
- Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Molecular Biology and Evolution 30(4): 772–780. https://doi.org/10.1093/molbev/mst010
- Kawase S (2014) Systematics of Biwia and Microphysogobio (Cyprinidae: Gobioninae). Doctoral dissertation, Graduate School, Kinki University, Japan.
- Kawase S, Hosoya K (2010) Biwia yodoensis, a new species from the Lake Biwa/Yodo River Basin, Japan (Teleostei: Cyprinidae). Ichthyological Exploration of Freshwaters 21: 1–7.
- Kottelat M (2001) Fishes of Laos. WHT Publications Ltd., Sri Lanka.
- Leviton AE, Gibbs RH, Heal E, Dawson CE (1985) Standards in herpetology and ichthyology: Part I. Standard symbolic codes for institutional resource collections in herpetology and ichthyology. Copeia 3: 802–832.
- Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler Transform. Bioinformatics 25(14): 1754–1760. https://doi.org/10.1093/bioinformatics/btp324
- Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R (2009) The sequence alignment/map format and SAMtools. Bioinformatics 25(16): 2078–2079. https://doi.org/10.1093/bioinformatics/btp352
- Li DH, Liu CM, Luo RB, Sadakane K, Lam TW (2015) MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph. Bioinformatics 31(10): 1674–1676. https://doi.org/10.1093/bioinformatics/btv033
- Li YH, Cao K, Fu CZ (2018) Ten fish mitogenomes of the tribe Gobionini (Cypriniformes: Cyprinidae: Gobioninae). Mitochondrial DNA. Part B, Resources 3(2): 802–803. https://doi.org/10.1080/23802359.2018.1467236
- Luo YL, Yue PQ, Chen YY (1977) Gobioninae. In: Wu HW (Eds) The Cyprinid Fishes of China (Vol. 2). Science Press, Beijing. [In Chinese]
- Minh BQ, Nguyen MA, von Haeseler A (2013) Ultrafast approximation for phylogenetic bootstrap. Molecular Biology and Evolution 30(5): 1188–1195. https://doi.org/10.1093/molbev/mst024
- Mori T (1934) The fresh water fishes of Jehol. In: Tokunaga S (Ed.) Report of the First Scientific Expedition to Manchoukuo (Vol. 5). Office of the Scientific Expedition to Manchoukuo, Faculty of Science and Engineering, Waseda University, Tokyo, 61 pp.
- Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ (2015) IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Molecular Biology and Evolution 32(1): 268–274. https://doi.org/10.1093/molbev/msu300
- Oshima M (1957) Notes on the fishes collected in the down stream of Tama River, with descriptions of two new species. Japanese Journal of Ichthyology 6: 14–19.
- Quinlan AR, Hall IM (2010) BEDTools: A flexible suite of utilities for comparing genomic features. Bioinformatics 26(6): 841–842. https://doi.org/10.1093/bioinformatics/btq033
- Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP (2012) MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space. Systematic Biology 61(3): 539–542. https://doi.org/10.1093/sysbio/sys029
- Stokes MF, Kim D, Gallen SF, Benavides E, Keck BP, Wood J, Goldberg SL, Larsen IJ, Mollish JM, Simmons JW, Near TJ, Perron JT (2023) Erosion of heterogeneous rock drives diversification of Appalachian fishes. Science 380(6647): 855–859. https://doi.org/10.1126/science.add9791
- Sun ZX, Zhao YH (2022) Revalidation and redescription of a gobionine species Microphysogobio bicolor (Nichols, 1930) (Teleostei: Cypriniformes) from the Yangtze River Basin, China. Zootaxa 5092(3): 361–377. https://doi.org/10.11646/zootaxa.5092.3.7
- Sun ZX, Kawase S, Zhang R, Zhao YH (2021) Taxonomic revision and redescription of Microphysogobio hsinglungshanensis, the type species of Microphysogobio Mori, 1934 (Cypriniformes: Cyprinidae). Journal of Fish Biology 99(2): 373–383. https://doi.org/10.1111/jfb.14725
- Sun ZX, Li XJ, Tang WQ, Zhao YH (2022a) A new species of the gudgeon genus Huigobio Fang, 1938 (Cypriniformes: Cyprinidae) from the Yangtze River Basin, southern China. Zoological Research 43(1): 33–39. https://doi.org/10.24272/j.issn.2095-8137.2021.168
- Sun ZX, Zhu BQ, Wu J, Zhao YH (2022b) A new species of the gudgeon genus Microphysogobio Mori, 1934 (Cypriniformes: Cyprinidae) from Zhejiang Province, China. Zoological Research 43(3): 356–361. https://doi.org/10.24272/j.issn.2095-8137.2021.398
- Sun ZX, Tang WQ, Zhao YH (2024) Redescription of Microphysogobio tungtingensis (Nichols, 1926) with the description of a new species of the genus (Cypriniformes, Gobionidae) from southern China. ZooKeys 1214: 161–186. https://doi.org/10.3897/zookeys.1214.127061
- Tan M, Armbruster JW (2018) Phylogenetic classification of extant genera of fishes of the order Cypriniformes (Teleostei: Ostariophysi). Zootaxa 4476: 006–039. https://doi.org/10.11646/zootaxa.4476.1.4
- Tang KL, Agnew MK, Chen WJ, Hirt MV, Raley ME, Sado T, Schneider LM, Yang L, Bart HL, He SP, Liu HZ, Miya M, Saitoh K, Simons AM, Wood RM, Mayden RL (2011) Phylogeny of the gudgeons (Teleostei: Cyprinidae: Gobioninae). Molecular Phylogenetics and Evolution 61(1): 103–124. https://doi.org/10.1016/j.ympev.2011.05.022
- Taranetz AY (1937) A note on a new genus of gudgeons from the Amur Basin. Bulletin of the Far Eastern Branch of the Academy of Sciences of the USSR 23: 113–115. [In Russian with English summary]
- Xie JM, Chen YR, Cai GJ, Cai RL, Hu Z, Wang H (2023) Tree Visualization By One Table (tvBOT): A web application for visualizing, modifying and annotating phylogenetic trees. Nucleic Acids Research 51(W1): 587–592. https://doi.org/10.1093/nar/gkad359
- Xu H, Xue Y, Ye Q, Luo X, Lü HJ, Chen DQ, Li Y (2016) Mitochondrial genome of the flat-lip gudgeon, Platysmacheilus exiguus (Teleostei, Cypriniformes). Mitochondrial DNA. Part A, DNA Mapping, Sequencing, and Analysis 27(1): 153–154. https://doi.org/10.3109/19401736.2013.878920
- Xue D (2010) Guide to collection, preservation, identification and information share of animal specimens. Standard Press of China, Beijing. [In Chinese]
- Yang JQ, He SP, Freyhof J, Witte K, Liu HZ (2006) The phylogenetic relationships of the Gobioninae (Teleostei: Cyprinidae) inferred from mitochondrial cytochrome b gene sequences. Hydrobiologia 553(1): 255–266. https://doi.org/10.1007/s10750-005-1301-3
- Yu LR, Yue PQ (1996) Studies on phylogeny of the Pseudogobiini fishes (Cypriniformes: Cyprinidae). Dong Wu Fen Lei Xue Bao 21: 244–255. [In Chinese with English abstract]
- Yue PQ (1998) Gobioninae. In: Chen YY (Ed.) Fauna Sinica, Osteichthyes, Cypriniforms II. Science Press, Beijing. [In Chinese]
- Zhang CG, Shao GZ, Wu HL, Zhao YH (2020) Species Catalogue of China (Vol. 2). Animals, Vertebrates (V), Fishes. Science Press, Beijing. [In Chinese]