Summary Statistics and Analysis Code for: Genetic Modulation of LDL-C and Triglyceride Response to Mediterranean-Style Diet
Description
Description: > This repository contains the analysis code and complete gene-level summary statistics supporting the manuscript "Genetic Modulation of LDL-C and Triglyceride Response to Mediterranean-Style Diet: Whole-Exome Evidence with a Focus on Plasma Lipoprotein Pathways".
Contents:
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Analysis Code: R scripts used for data processing, exome-wide association analysis, targeted pathway analysis (Plasma Lipoprotein Assembly, Remodeling, and Clearance), and figure generation. (Also mirrored on GitHub: https://github.com/saba966/Nutrigen_LDL_GWAS) . * Summary Statistics: An Excel workbook containing the full results for both the exome-wide and targeted analyses, including Simes p-values, FDR scores, and minor allele counts for ΔLDL-C and ΔTAG .
Note: Raw individual-level genomic data (WES) are restricted due to ethical and privacy regulations and are not included in this public repository.
Files
Lipid_Nutrigen_WES_R_Script.zip
Files
(35.7 kB)
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Additional details
Software
- Repository URL
- https://github.com/saba966/Nutrigen_LDL_GWAS
- Programming language
- R