Published March 4, 2026
| Version v3.0.8.0
Software
Open
github.com/broadinstitute/viral-pipelines/sarscov2_illumina_full
Authors/Creators
Description
Full SARS-CoV-2 analysis workflow starting from raw Illumina flowcell (tar.gz) and metadata and performing assembly, spike-in analysis, qc, lineage assignment, and packaging for data release.
Files
github.com-broadinstitute-viral-pipelines-sarscov2_illumina_full_v3.0.8.0.zip
Files
(130.9 kB)
| Name | Size | Download all |
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md5:bc8133d37837a41107080355da646188
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Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.18870030 (URL)
- https://dockstore.org/workflows/github.com/broadinstitute/viral-pipelines/sarscov2_illumina_full:v3.0.8.0 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fviral-pipelines%2Fsarscov2_illumina_full/versions/v3.0.8.0/PLAIN-WDL/descriptor/sarscov2_illumina_full.wdl (URL)