Raw data from: A leaf phenomics approach to estimating below-ground traits in North American Licorice
Description
Premise of the study: Selective breeding over thousands of years has prioritized above-ground yield, with little regard for changes happening below-ground. Despite their central role in plant success and resilience, our knowledge of roots lags behind above-ground structures. Accurately phenotyping root traits is labor-intensive, expensive, and destructive. In order to advance understanding of the fundamental biology underlying root systems, and to integrate hard-to-measure root traits into breeding programs, high-throughput non-destructive methods are required.
Methods: This study uses American licorice (Glycyrrhiza lepidota Pursh.), a perennial legume with a rich ethnobotanical history, as a model to investigate root system phenotypes. We assess root traits across multiple populations, analyze relationships between above- and below-ground phenotypes, and test the use of multidimensional leaf traits, including spectral reflectance, in predicting root traits.
Key results: American licorice displays significant variation in root traits across source populations and strong correlations between above- and below-ground traits. Leaf spectral reflectance and elemental composition show promise in modeling below-ground traits, though the isometric relationship between plant size and root traits complicates model accuracy.
Conclusions: These findings demonstrate the use of high-dimensional leaf traits as a proxy for root traits, with potential applications for understanding foundational questions in plant biology and in breeding programs targeting the below-ground structures of perennial herbaceous species. Further optimization and larger studies are needed to improve predictive models.
This repository contains a .zip archive of the raw images used for analysis. Scripts and other associated data can be found at https://doi.org/10.6084/m9.figshare.28742870.
Files
Raw Images.zip
Files
(36.9 GB)
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Additional details
Funding
- Foundation for Food and Agriculture Research
- High dimensional phenomics and automation to transform cost and timeframe of early stage domestication of new crops
- U.S. National Science Foundation
- New Roots for Restoration: integrating plant traits, communities, and the soil ecosphere to advance restoration of natural and agricultural systems
- Herb Society of America
Software
- Repository URL
- https://doi.org/10.6084/m9.figshare.28742870
- Programming language
- R