UMBB-IIS-Princesa/Quantitative-Proteomics-Pipeline: Initial release - Quantitative Proteomics Pipeline

This release contains the initial version of the pipeline for quantitative proteomics data analysis, described in the associated methods chapter.

The workflow includes scripts for:

• Data preprocessing and quality control
• Normalization
• Missing value handling
• Differential protein expression analysis
• Functional enrichment
• Network visualization

This version corresponds to the code used in the manuscript at the time of submission.