Baud-lab/hermes-wire
Authors/Creators
-
1.
Centre for Genomic Regulation
Description
Developed in the Baud Lab at the Centre for Genomic Regulation (CRG) and Universitat Pompeu Fabra (UPF), Barcelona. We acknowledge support from the Bioinformatics Core Facility and the CRG Scientific IT team. Furthermore, the data used and tested for the development of this tool was generated in collaboration with NIDA and the Center for Microbiome Innovation, being available on Qiita - Study 11479. The project received the support of La Caixa Foundation.
This if the first release, containing all necessary codes to replicate the findings of the PhD thesis Host genetics shapes crypt niche colonisation by keystone gut bacteria, influencing metabolic health.
Citation: Morillo Sanz Dias, F. (2026). Host genetics shapes crypt niche colonisation by keystone gut bacteria, influencing metabolic health. Zenodo. https://doi.org/10.5281/zenodo.18663497
Files
Baud-lab/hermes-wire-v1.0.zip
Files
(417.9 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:47724d298c33d5d7585379d7c7f3b743
|
417.9 MB | Preview Download |
Additional details
Related works
- Is derived from
- Thesis: 10.5281/zenodo.1866349718663497 (DOI)
- Is supplement to
- Software: https://github.com/Baud-lab/hermes-wire/tree/v1.0 (URL)
Software
- Repository URL
- https://github.com/Baud-lab/hermes-wire
- Programming language
- R , Python , Nextflow
- Development Status
- Active
References
- Host genetics shapes crypt niche colonisation by keystone gut bacteria, influencing metabolic health.