Glucose Forecasting and Hypoglycemia Forewarning in Type 1 and Type 2 Diabetes using Deep Learning
Description
Introduction
This is the official implementation of:
Glucose forecasting and hypoglycemia forewarning in type 1 and type 2 diabetes using deep learning
Source code: DL_BGPred-main.zip
Publicly Available Diabetes Dataset
This repository also archives publicly available datasets for type 1 and type 2 diabetes for convenience. Please cite the original sources when using these data. Details of these datasets are shown in Table 1.
Table 1. Dataset Information
|
REAGENT OR RESOURCE |
SOURCE |
IDENTIFIER |
FILE NAME |
|
OhioT1DM |
Marling and Bunescu [1] |
https://pubmed.ncbi.nlm.nih.gov/33584164/ |
N/A |
|
Loop Study |
Lum et al. [2] |
https://doi.org/10.1089/dia.2020.0535 |
|
|
RT CGM |
JDRF CGM Study Group [3] |
https://doi.org/10.1089/dia.2007.0302 |
|
|
Replace BG |
Aleppo et al. [4] |
https://pubmed.ncbi.nlm.nih.gov/28209654/ |
|
|
ShanghaiT1DM |
Zhao et al. [5] |
https://doi.org/10.6084/m9.figshare.20444397 |
|
|
ShanghaiT2DM |
Zhao et al. [5] |
https://doi.org/10.6084/m9.figshare.20444397 |
|
|
Pone |
Colas et al. [6] |
https://doi.org/10.1371/journal.pone.0225817.s001 |
References
[1] Marling, C., and Bunescu, R. (2020). The OhioT1DM dataset for blood glucose level prediction: Update 2020. CEUR Workshop Proc. 2675, 71–74.
[2] Lum, J.W., Bailey, R.J., Barnes-Lomen, V., Naranjo, D., Hood, K.K., Lal, R.A., Arbiter, B., Brown, A.S., DeSalvo, D.J., Pettus, J., et al. (2021). A real-world prospective study of the safety and effectiveness of the loop open source automated insulin delivery system. Diabetes Technol. Ther. 23, 367–375.
[3] JDRF CGM Study Group (2008). JDRF randomized clinical trial to assess the efficacy of real-time continuous glucose monitoring in the management of type 1 diabetes: Research design and methods. Diabetes Technol. Ther. 10, 310–321.
[4] Aleppo, G., Ruedy, K.J., Riddlesworth, T.D., Kruger, D.F., Peters, A.L., Hirsch, I., Bergenstal, R.M., Toschi, E., Ahmann, A.J., Shah, V.N., et al. (2017). REPLACE-BG: A randomized trial comparing continuous glucose monitoring with and without routine blood glucose monitoring in adults with well-controlled type 1 diabetes. Diabetes Care 40, 538–545.
[5] Zhao, Q., Zhu, J., Shen, X., Lin, C., Zhang, Y., Liang, Y., Cao, B., Li, J., Liu, X., Rao, W., et al. (2023). Chinese diabetes datasets for data-driven machine learning. Sci. Data 10, 35.
[6] Colas, A., Vigil, L., Vargas, B., Cuesta-Frau, D., and Varela, M. (2019). Detrended fluctuation analysis in the prediction of type 2 diabetes mellitus in patients at risk: Model optimization and comparison with other metrics. PLOS One 14, e0225817.
Files
diabetes datasets.zip
Files
(1.9 GB)
| Name | Size | Download all |
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md5:b492aa8f709e715d81f674b3f932bade
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3.7 MB | Preview Download |
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md5:32c1f4fd568b260542fc064a5cc421be
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9.3 MB | Preview Download |
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md5:9b680ed6050d158c5ba282aafbac3ec0
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1.6 GB | Preview Download |
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md5:c4f83f012ab43b4687a7b91afa198ce8
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688.3 kB | Preview Download |
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md5:4e0bd119c2329330e74f2ccc9eb4cf58
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130.1 MB | Preview Download |
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md5:5c0b2c416be7aab0bc265c956db31ddf
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104.3 MB | Preview Download |
Additional details
Software
- Repository URL
- https://github.com/Ezio660914/DL_BGPred
- Programming language
- Python