Published February 10, 2026
| Version v4
Dataset
Open
SARS-CoV-2 mutational trajectories dataset
Authors/Creators
Description
This dataset contains mutation frequency data derived from in vitro evolution experiments of the SARS-CoV-2 spike receptor-binding motif (RBM), conducted under low-stringency (LSS) and high-stringency (HSS) selection pressures. The data capture position-specific mutation distributions and frequencies across multiple rounds of selection and across several RBM variants. These experiments were designed to assess how laboratory-driven evolution parallels the natural evolution of SARS-CoV-2, particularly in the context of ACE2 receptor binding — the critical first step in viral infection.
Files
per_residue_observed_codon_frequencies.zip
Files
(3.2 GB)
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Additional details
Funding
- Ministry of Education Youth and Sports
- National Infrastructure for Biological and Medical Imaging LM2023050 Czech-BioImaging
- European Commission
- The National Institute of Virology and Bacteriology LX22NPO5103
- Czech Science Foundation
- Unveiling Divergence and Convergence Points in Coronavirus Evolution for Host Receptor Recognition 25-17643M
- Czech Science Foundation
- Institutional support of the Institute of Biotechnology RVO:86652036
- Ministry of Education Youth and Sports
- e-INFRASTUCTURE CZ LM2023054
- Ministry of Education Youth and Sports
- Modernization of e-INFRA CZ II CZ.02.01.01/00/23_016/0008329
- Ministry of Education Youth and Sports
- ELIXIR-CZ LM2023055
- Ministry of Education Youth and Sports
- ELIXIR CZ: Capacity extension CZ.02.01.01/00/23_015/0008210
Software
- Repository URL
- https://github.com/host-patho-evo/mutation_scatter_plot
- Programming language
- Python
- Development Status
- Active