Published February 6, 2026
| Version v3.0.4.0
Software
Open
github.com/broadinstitute/viral-pipelines/sarscov2_gisaid_ingest
Authors/Creators
Description
Sanitize data downloaded from GISAID for use in Nextstrain/augur. See: https://nextstrain.github.io/ncov/data-prep#curate-data-from-the-full-gisaid-database
Files
github.com-broadinstitute-viral-pipelines-sarscov2_gisaid_ingest_v3.0.4.0.zip
Files
(26.7 kB)
| Name | Size | Download all |
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md5:91d178da2e5fd635b8701f9de14eb4af
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26.7 kB | Preview Download |
Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.18506737 (URL)
- https://dockstore.org/workflows/github.com/broadinstitute/viral-pipelines/sarscov2_gisaid_ingest:v3.0.4.0 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fviral-pipelines%2Fsarscov2_gisaid_ingest/versions/v3.0.4.0/PLAIN-WDL/descriptor/sarscov2_gisaid_ingest.wdl (URL)