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Published February 6, 2026 | Version v3.0.4.0
Software Open

github.com/broadinstitute/viral-pipelines/sarscov2_genbank

Authors/Creators

Description

Prepare SARS-CoV-2 assemblies for Genbank submission. This includes QC checks with NCBI's VADR tool and filters out genomes that do not pass its tests.

Files

github.com-broadinstitute-viral-pipelines-sarscov2_genbank_v3.0.4.0.zip

Files (42.9 kB)

Additional details

Related works

Is identical to
https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.18506728 (URL)
https://dockstore.org/workflows/github.com/broadinstitute/viral-pipelines/sarscov2_genbank:v3.0.4.0 (URL)
https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fviral-pipelines%2Fsarscov2_genbank/versions/v3.0.4.0/PLAIN-WDL/descriptor/sarscov2_genbank.wdl (URL)