Published July 20, 2022 | Version v1
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Bioinformatics pipeline for wastewater SARS-CoV-2 sequence data

  • 1. ROR icon Syracuse University

Description

This is a Snakemake pipeline to identify and quantify SARS-CoV2 variants in waste water samples from across New York State using Freyja.

Files

NYWWS-split.zip

Files (21.4 MB)

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md5:7ad7cd413ad4a02339bf9bf26fdd4618
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Additional details

Software

Programming language
Python , R , Shell